Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0473800 Oryza sativa ssp. japonica HOM05D006046 ORTHO05D007580 1.6e-124 449.5 243 100.0
Zm00001eb332380 Zea mays HOM05D006046 ORTHO05D007580 3.7e-28 129.4 63 93.7
Os01g0286600 Oryza sativa ssp. japonica HOM05D006046 ORTHO05D007580 8.3e-28 128.3 63 92.1
CDE11G0173 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 4.5e-26 122.5 62 88.7
GSVIVG01028241001 Vitis vinifera HOM05D006046 ORTHO05D007580 1.0e-25 121.3 63 87.3
Gohir.D11G110200 Gossypium hirsutum HOM05D006046 ORTHO05D007580 1.3e-25 120.9 63 87.3
Gorai.007G117800 Gossypium raimondii HOM05D006046 ORTHO05D007580 1.3e-25 120.9 63 87.3
CiPaw.07G126200 Carya illinoinensis HOM05D006046 ORTHO05D007580 1.7e-25 120.6 62 88.7
Manes.05G008200 Manihot esculenta HOM05D006046 ORTHO05D007580 1.7e-25 120.6 62 88.7
HPP92_010589 Vanilla planifolia HOM05D006046 ORTHO05D007580 2.3e-25 120.2 63 85.7
AUR62040510 Chenopodium quinoa HOM05D006046 ORTHO05D007580 3.8e-25 119.4 64 82.8
Eucgr.K00558 Eucalyptus grandis HOM05D006046 ORTHO05D007580 5.0e-25 119.0 63 85.7
Thhalv10028544m.g Eutrema salsugineum HOM05D006046 ORTHO05D007580 5.0e-25 119.0 62 87.1
Sp6g01580 Schrenkiella parvula HOM05D006046 ORTHO05D007580 5.0e-25 119.0 62 87.1
TAR633G1601 Trochodendron aralioides HOM05D006046 ORTHO05D007580 5.0e-25 119.0 63 85.7
Actinidia21336 Actinidia chinensis HOM05D006046 ORTHO05D007580 8.6e-25 118.2 62 85.5
Ah.12g061390 Amaranthus hybridus HOM05D006046 ORTHO05D007580 8.6e-25 118.2 65 84.6
SGA_v2.0_scaffold572G52966 Striga asiatica HOM05D006046 ORTHO05D007580 8.6e-25 118.2 63 82.5
Thecc.01G326200 Theobroma cacao HOM05D006046 ORTHO05D007580 8.6e-25 118.2 63 87.3
Haze_05155 Corylus avellana HOM05D006046 ORTHO05D007580 1.5e-24 117.5 66 83.3
Sed0002893 Sechium edule HOM05D006046 ORTHO05D007580 1.5e-24 117.5 62 83.9
THA.LOC104825927 Tarenaya hassleriana HOM05D006046 ORTHO05D007580 1.5e-24 117.5 62 85.5
AUR62042113 Chenopodium quinoa HOM05D006046 ORTHO05D007580 1.9e-24 117.1 64 81.2
Gohir.A11G105300 Gossypium hirsutum HOM05D006046 ORTHO05D007580 1.9e-24 117.1 63 85.7
TWI59G0782 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 2.5e-24 116.7 63 82.5
Duzib133G1070 Durio zibethinus HOM05D006046 ORTHO05D007580 3.3e-24 116.3 63 85.7
Psat6g158600 Pisum sativum HOM05D006046 ORTHO05D007580 3.3e-24 116.3 62 85.5
Atru.chr5.852 Acer truncatum HOM05D006046 ORTHO05D007580 4.2e-24 115.9 62 85.5
ATR0796G090 Amborella trichopoda HOM05D006046 ORTHO05D007580 4.2e-24 115.9 62 85.5
COL.COLO4_23120 Corchorus olitorius HOM05D006046 ORTHO05D007580 4.2e-24 115.9 63 85.7
MELO3C005189.2 Cucumis melo HOM05D006046 ORTHO05D007580 4.2e-24 115.9 62 83.9
CsaV3_5G018640 Cucumis sativus L. HOM05D006046 ORTHO05D007580 4.2e-24 115.9 62 83.9
Sed0026667 Sechium edule HOM05D006046 ORTHO05D007580 4.2e-24 115.9 62 82.3
TAR362G0326 Trochodendron aralioides HOM05D006046 ORTHO05D007580 4.2e-24 115.9 63 81.0
Aqoxy5G02854 Aquilegia oxysepala HOM05D006046 ORTHO05D007580 5.5e-24 115.5 62 83.9
CANSAT25G3010 Cannabis sativa HOM05D006046 ORTHO05D007580 5.5e-24 115.5 63 82.5
TPR.G3061 Trifolium pratense HOM05D006046 ORTHO05D007580 5.5e-24 115.5 62 85.5
VMungo0720G0414 Vigna mungo HOM05D006046 ORTHO05D007580 5.5e-24 115.5 62 82.3
CAN.G179.31 Capsicum annuum HOM05D006046 ORTHO05D007580 7.2e-24 115.2 63 81.0
Dinv33175 Davidia involucrata HOM05D006046 ORTHO05D007580 7.2e-24 115.2 62 83.9
HanXRQChr10g0286481 Helianthus annuus HOM05D006046 ORTHO05D007580 7.2e-24 115.2 62 83.9
Potri.002G186300 Populus trichocarpa HOM05D006046 ORTHO05D007580 7.2e-24 115.2 62 83.9
Sabra02G0148100 Salix brachista HOM05D006046 ORTHO05D007580 7.2e-24 115.2 62 83.9
Sabra02G0148500 Salix brachista HOM05D006046 ORTHO05D007580 7.2e-24 115.2 62 83.9
Ca_10238_v3 Cicer arietinum L. HOM05D006046 ORTHO05D007580 9.5e-24 114.8 62 83.9
Duzib138G1207 Durio zibethinus HOM05D006046 ORTHO05D007580 9.5e-24 114.8 63 82.5
Medtr1g085730 Medicago truncatula HOM05D006046 ORTHO05D007580 9.5e-24 114.8 62 83.9
arahy.Tifrunner.gnm1.ann1.11DDVR Arachis hypogaea HOM05D006046 ORTHO05D007580 1.2e-23 114.4 62 83.9
ClCG01G007200 Citrullus lanatus HOM05D006046 ORTHO05D007580 1.2e-23 114.4 62 82.3
PGR142G1127 Punica granatum HOM05D006046 ORTHO05D007580 1.2e-23 114.4 63 82.5
Phvul.007G208700 Phaseolus vulgaris HOM05D006046 ORTHO05D007580 1.6e-23 114.0 62 80.6
CARHR249980 Cardamine hirsuta HOM05D006046 ORTHO05D007580 2.1e-23 113.6 62 85.5
Ciclev10019590m.g Citrus clementina HOM05D006046 ORTHO05D007580 2.1e-23 113.6 62 82.3
Migut.D00009 Erythranthe guttata HOM05D006046 ORTHO05D007580 2.1e-23 113.6 63 81.0
Nn4g25300 Nelumbo nucifera HOM05D006046 ORTHO05D007580 2.1e-23 113.6 62 82.3
Potri.014G111600 Populus trichocarpa HOM05D006046 ORTHO05D007580 2.1e-23 113.6 62 82.3
arahy.Tifrunner.gnm1.ann1.01TYUM Arachis hypogaea HOM05D006046 ORTHO05D007580 2.8e-23 113.2 62 82.3
Hma1.2p1_0408F.1_g146250 Hydrangea macrophylla HOM05D006046 ORTHO05D007580 2.8e-23 113.2 62 80.6
Lj5g0023586 Lotus japonicus HOM05D006046 ORTHO05D007580 3.6e-23 112.8 62 82.3
MSTRG.18059 Avicennia marina HOM05D006046 ORTHO05D007580 4.7e-23 112.5 63 77.8
Lalb_Chr02g0147181 Lupinus albus HOM05D006046 ORTHO05D007580 4.7e-23 112.5 62 80.6
Prupe.3G001700 Prunus persica HOM05D006046 ORTHO05D007580 4.7e-23 112.5 62 82.3
PSO210G0070 Papaver somniferum HOM05D006046 ORTHO05D007580 6.1e-23 112.1 63 79.4
PSO761G0347 Papaver somniferum HOM05D006046 ORTHO05D007580 6.1e-23 112.1 63 79.4
CSS0022330 Camellia sinensis var. sinensis HOM05D006046 ORTHO05D007580 8.0e-23 111.7 62 82.3
FvH4_1g26170 Fragaria vesca HOM05D006046 ORTHO05D007580 8.0e-23 111.7 62 82.3
FAN19G1511 Fragaria x ananassa HOM05D006046 ORTHO05D007580 8.0e-23 111.7 62 82.3
Lalb_Chr21g0309871 Lupinus albus HOM05D006046 ORTHO05D007580 8.0e-23 111.7 62 82.3
Cpa.g.sc57.26 Carica papaya HOM05D006046 ORTHO05D007580 1.4e-22 110.9 62 80.6
FAN23G1049 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.8e-22 110.5 62 80.6
FAN28G0956 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.8e-22 110.5 62 80.6
MD09G1291200 Malus domestica HOM05D006046 ORTHO05D007580 1.8e-22 110.5 62 80.6
Peaxi162Scf00309g00623 Petunia axillaris HOM05D006046 ORTHO05D007580 1.8e-22 110.5 63 77.8
Oeu052589.3 Olea europaea HOM05D006046 ORTHO05D007580 2.3e-22 110.2 62 77.4
AL6G51640 Arabidopsis lyrata HOM05D006046 ORTHO05D007580 3.0e-22 109.8 62 82.3
Lsat_1_v5_gn_9_7041 Lactuca sativa HOM05D006046 ORTHO05D007580 4.0e-22 109.4 62 77.4
Hund03590 Selenicereus undatus HOM05D006046 ORTHO05D007580 4.0e-22 109.4 63 79.4
AT4G01690 Arabidopsis thaliana HOM05D006046 ORTHO05D007580 5.2e-22 109.0 62 82.3
ECA247G1361 Erigeron canadensis HOM05D006046 ORTHO05D007580 5.2e-22 109.0 62 79.0
BcaC05g24615 Brassica carinata HOM05D006046 ORTHO05D007580 8.9e-22 108.2 62 80.6
A10p01090 Brassica napus HOM05D006046 ORTHO05D007580 8.9e-22 108.2 62 80.6
C05p01130 Brassica napus HOM05D006046 ORTHO05D007580 8.9e-22 108.2 62 80.6
BolC5t28894H Brassica oleracea HOM05D006046 ORTHO05D007580 8.9e-22 108.2 62 80.6
BraA10t42387Z Brassica rapa HOM05D006046 ORTHO05D007580 8.9e-22 108.2 62 80.6
RcHm_v2.0_Chr3g0485661 Rosa chinensis HOM05D006046 ORTHO05D007580 8.9e-22 108.2 62 79.0
FAN26G1773 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.2e-21 107.8 62 80.6
QL12p035018 Quercus lobata HOM05D006046 ORTHO05D007580 1.2e-21 107.8 174 43.1
Aa31LG5G1400 Aethionema arabicum HOM05D006046 ORTHO05D007580 1.5e-21 107.5 62 77.4
Rhsim01G0000700 Rhododendron simsii HOM05D006046 ORTHO05D007580 2.0e-21 107.1 62 79.0
AagrBONN_evm.TU.Sc2ySwM_368.2775 Anthoceros agrestis HOM05D006046 ORTHO05D007580 2.6e-21 106.7 65 75.4
Solyc01g079090.4 Solanum lycopersicum HOM05D006046 ORTHO05D007580 2.6e-21 106.7 63 76.2
Sopen01g030600 Solanum pennellii HOM05D006046 ORTHO05D007580 2.6e-21 106.7 63 76.2
PGSC0003DMG400001117 Solanum tuberosum HOM05D006046 ORTHO05D007580 2.6e-21 106.7 63 76.2
Glyma.10G138600 Glycine max HOM05D006046 ORTHO05D007580 3.4e-21 106.3 62 79.0
Carub.0006s3551 Capsella rubella HOM05D006046 ORTHO05D007580 4.4e-21 105.9 62 80.6
DCAR_002940 Daucus carota HOM05D006046 ORTHO05D007580 4.4e-21 105.9 62 79.0
EL10Ac2g02399 Beta vulgaris HOM05D006046 ORTHO05D007580 5.7e-21 105.5 63 76.2
Cc01_g21760 Coffea canephora HOM05D006046 ORTHO05D007580 5.7e-21 105.5 64 75.0
Nitab4.5_0000222g0400 Nicotiana tabacum HOM05D006046 ORTHO05D007580 1.7e-20 104.0 66 72.7
Nitab4.5_0003092g0030 Nicotiana tabacum HOM05D006046 ORTHO05D007580 1.7e-20 104.0 66 72.7
Mapoly0001s0469 Marchantia polymorpha HOM05D006046 ORTHO05D007580 3.7e-20 102.8 63 71.4
vmacro02355 Vaccinium macrocarpon HOM05D006046 ORTHO05D007580 4.9e-20 102.4 62 75.8
SMO356G0553 Selaginella moellendorffii HOM05D006046 ORTHO05D007580 8.3e-20 101.7 63 73.0
Glyma.02G007166 Glycine max HOM05D006046 ORTHO05D007580 1.1e-19 101.3 56 82.1
Lj1C7T2 Lonicera japonica HOM05D006046 ORTHO05D007580 1.4e-19 100.9 57 80.7
CBR_g88557 Chara braunii HOM05D006046 ORTHO05D007580 3.2e-19 99.8 63 71.4
Pp3c1_34400 Physcomitrium patens HOM05D006046 ORTHO05D007580 7.0e-19 98.6 65 66.2
AUR62044205 Chenopodium quinoa HOM05D006046 ORTHO05D007580 1.7e-17 94.0 49 83.7
Cre09.g396300 Chlamydomonas reinhardtii HOM05D006046 ORTHO05D007580 1.0e-14 84.7 58 70.7
PRCOL_00002487 Prasinoderma coloniale HOM05D006046 ORTHO05D007580 3.4e-13 79.7 61 54.1
MCO14G379 Micromonas commoda HOM05D006046 ORTHO05D007580 1.2e-10 71.2 61 47.5


User provided reference genes

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