Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0374450 Oryza sativa ssp. japonica HOM05D000146 ORTHO05D295246 2.2e-120 435.6 218 100.0
Zm00001eb031760 Zea mays HOM05D000146 ORTHO05D006703 3.8e-08 62.8 39 76.9
Os12g0614600 Oryza sativa ssp. japonica HOM05D000146 ORTHO05D006703 6.5e-08 62.0 39 74.4
Os03g0642300 Oryza sativa ssp. japonica HOM05D000146 ORTHO05D006703 1.5e-07 60.8 39 74.4
HPP92_021809 Vanilla planifolia HOM05D000146 ORTHO05D000178 3.2e-07 59.7 39 69.2
TWI77G0593 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 7.2e-07 58.5 39 71.8
HPP92_014002 Vanilla planifolia HOM05D000146 ORTHO05D006703 7.2e-07 58.5 39 69.2
Duzib187G1702 Durio zibethinus HOM05D000146 ORTHO05D000178 9.4e-07 58.2 49 61.2
AagrBONN_evm.TU.Sc2ySwM_117.1249 Anthoceros agrestis HOM05D000146 ORTHO05D000178 2.1e-06 57.0 50 60.0
CDE02G0618 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 2.7e-06 56.6 39 69.2
CDE04G3222 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 2.7e-06 56.6 39 69.2
Peaxi162Scf00984g00249 Petunia axillaris HOM05D000146 ORTHO05D000178 2.7e-06 56.6 49 59.2
TWI74G0847 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 2.7e-06 56.6 39 69.2
Aa31LG10G6690 Aethionema arabicum HOM05D000146 ORTHO05D006703 3.6e-06 56.2 39 69.2
ATR0757G032 Amborella trichopoda HOM05D000146 ORTHO05D000178 3.6e-06 56.2 55 52.7
Aqoxy7G02085 Aquilegia oxysepala HOM05D000146 ORTHO05D000178 3.6e-06 56.2 49 59.2
Manes.06G053600 Manihot esculenta HOM05D000146 ORTHO05D000178 3.6e-06 56.2 49 61.2
Solyc12g006690.2 Solanum lycopersicum HOM05D000146 ORTHO05D000178 3.6e-06 56.2 49 59.2
TWI63G1805 Tripterygium wilfordii HOM05D000146 ORTHO05D000178 3.6e-06 56.2 49 59.2
PSO170G0592 Papaver somniferum HOM05D000146 ORTHO05D000178 4.7e-06 55.8 49 59.2
PSO455G0197 Papaver somniferum HOM05D000146 ORTHO05D000178 4.7e-06 55.8 49 59.2
Sopen12g002640 Solanum pennellii HOM05D000146 ORTHO05D000178 4.7e-06 55.8 49 59.2
ATR1156G036 Amborella trichopoda HOM05D000146 ORTHO05D000178 6.1e-06 55.5 53 62.3
Cc06_g08850 Coffea canephora HOM05D000146 ORTHO05D000178 6.1e-06 55.5 49 59.2
Duzib093G0097 Durio zibethinus HOM05D000146 ORTHO05D000178 6.1e-06 55.5 39 69.2
Peaxi162Scf00163g00051 Petunia axillaris HOM05D000146 ORTHO05D000178 6.1e-06 55.5 39 66.7
AUR62030110 Chenopodium quinoa HOM05D000146 ORTHO05D006703 8.0e-06 55.1 49 59.2
AUR62042462 Chenopodium quinoa HOM05D000146 ORTHO05D006703 8.0e-06 55.1 49 59.2
Dinv41535 Davidia involucrata HOM05D000146 ORTHO05D000178 8.0e-06 55.1 49 57.1
Gohir.A05G362800 Gossypium hirsutum HOM05D000146 ORTHO05D000178 8.0e-06 55.1 49 59.2
Gohir.A09G137800 Gossypium hirsutum HOM05D000146 ORTHO05D000178 8.0e-06 55.1 39 66.7
Gohir.D04G051600 Gossypium hirsutum HOM05D000146 ORTHO05D000178 8.0e-06 55.1 49 59.2
Gohir.D09G136800 Gossypium hirsutum HOM05D000146 ORTHO05D000178 8.0e-06 55.1 39 66.7
Gorai.006G156900 Gossypium raimondii HOM05D000146 ORTHO05D000178 8.0e-06 55.1 39 66.7
Gorai.012G057700 Gossypium raimondii HOM05D000146 ORTHO05D000178 8.0e-06 55.1 49 59.2
Os12g0480200 Oryza sativa ssp. japonica HOM05D000146 ORTHO05D000178 8.0e-06 55.1 39 66.7
RcHm_v2.0_Chr2g0089181 Rosa chinensis HOM05D000146 ORTHO05D000178 8.0e-06 55.1 49 59.2
PGSC0003DMG400020682 Solanum tuberosum HOM05D000146 ORTHO05D000178 8.0e-06 55.1 49 57.1
TAR622G0549 Trochodendron aralioides HOM05D000146 ORTHO05D000178 8.0e-06 55.1 49 59.2


User provided reference genes

Program Settings