Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0147250 Oryza sativa ssp. japonica HOM05D011046 ORTHO05D013342 3.0e-181 639.8 855 100.0
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 1.8e-61 241.9 800 68.5
Zm00001eb059330 Zea mays HOM05D011046 ORTHO05D013342 4.1e-37 161.0 195 44.1
Zm00001eb398710 Zea mays HOM05D011046 ORTHO05D013342 4.1e-37 161.0 195 44.6
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 1.5e-36 159.1 427 62.5
Zm00001eb191870 Zea mays HOM05D011046 ORTHO05D013342 2.0e-36 158.7 195 43.6
Zm00001eb210080 Zea mays HOM05D011046 ORTHO05D013342 2.1e-25 122.1 392 63.3
Zm00001eb121340 Zea mays HOM05D011046 ORTHO05D013342 1.0e-19 103.2 153 39.2
Zm00001eb272070 Zea mays HOM05D011046 ORTHO05D013342 1.0e-19 103.2 153 39.2
Zm00001eb324030 Zea mays HOM05D011046 ORTHO05D013342 1.0e-19 103.2 153 39.2
Zm00001eb336430 Zea mays HOM05D011046 ORTHO05D013342 1.0e-19 103.2 153 39.2
Zm00001eb427360 Zea mays HOM05D011046 ORTHO05D013342 1.0e-19 103.2 153 39.2
Zm00001eb442860 Zea mays HOM05D011046 ORTHO05D013342 1.0e-19 103.2 153 39.2
Zm00001eb162850 Zea mays HOM05D011046 ORTHO05D013342 4.5e-12 77.8 56 64.3
Zm00001eb376460 Zea mays HOM05D011046 ORTHO05D013342 4.5e-12 77.8 56 64.3
Zm00001eb420780 Zea mays HOM05D011046 ORTHO05D013342 4.5e-12 77.8 56 64.3
Zm00001eb442110 Zea mays HOM05D011046 ORTHO05D013342 4.5e-12 77.8 56 64.3
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 1.6e-09 69.3 73 49.3
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 8.0e-09 67.0 111 43.2
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 5.2e-08 64.3 69 46.4
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 1.5e-07 62.8 61 49.2
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 2.6e-07 62.0 61 47.5
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 4.4e-07 61.2 74 41.9
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 7.5e-07 60.5 74 40.5
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 1.3e-06 59.7 86 37.2
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.3e-06 59.7 86 37.2
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 1.3e-06 59.7 59 49.2
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.7e-06 59.3 61 45.9
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 2.2e-06 58.9 69 42.0
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 2.8e-06 58.5 67 43.3
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 2.8e-06 58.5 61 45.9
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.7e-06 58.2 95 36.8
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 3.7e-06 58.2 61 45.9
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 4.8e-06 57.8 70 41.4
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 4.8e-06 57.8 69 43.5
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 8.2e-06 57.0 61 44.3
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 8.2e-06 57.0 67 43.3
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 8.2e-06 57.0 71 39.4
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 8.2e-06 57.0 71 39.4
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 8.2e-06 57.0 71 39.4
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 8.2e-06 57.0 71 39.4
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 8.2e-06 57.0 71 39.4


User provided reference genes

Program Settings