Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0135400 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D293454 4.9e-224 780.8 387 100.0
Os10g0135500 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D296690 1.7e-123 446.8 406 61.3
Os10g0135300 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D298170 2.6e-92 343.2 414 51.0
Zm00001eb323800 Zea mays HOM05D010111 ORTHO05D049854 1.7e-43 181.0 422 35.1
Zm00001eb323830 Zea mays HOM05D010111 ORTHO05D010635 7.7e-36 155.6 391 33.5
Os07g0554100 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D049854 1.1e-34 151.8 402 34.6
Os07g0554500 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D293036 8.0e-33 145.6 422 32.5
Zm00001eb323630 Zea mays HOM05D010111 ORTHO05D442090 2.6e-31 140.6 403 30.0
Os04g0258900 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D049910 1.1e-29 135.2 426 30.5
Os07g0554900 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D010635 2.7e-28 130.6 420 31.9
Os07g0555300 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D300934 2.9e-27 127.1 262 38.2
Os07g0554200 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D293391 2.7e-25 120.6 306 34.6
Zm00001eb086820 Zea mays HOM05D010111 ORTHO05D049910 4.7e-25 119.8 428 29.4
Os07g0554600 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D298990 2.0e-23 114.4 212 38.2
Zm00001eb235920 Zea mays HOM05D010111 ORTHO05D050053 2.8e-22 110.5 452 28.8
Os07g0555100 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D296422 5.0e-19 99.8 343 28.0
Os07g0555400 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D294308 5.2e-16 89.7 173 41.6
Os09g0259500 Oryza sativa ssp. japonica HOM05D020709 ORTHO05D293292 5.9e-12 76.3 381 27.6
Os07g0555000 Oryza sativa ssp. japonica HOM05D010111 ORTHO05D299718 1.7e-11 74.7 397 24.4
Zm00001eb042100 Zea mays HOM05D028964 ORTHO05D010635 6.6e-11 72.8 397 24.9
Os09g0344400 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D297318 4.3e-10 70.1 149 32.2
Os09g0324200 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D023030 8.0e-09 65.9 147 34.0
Os09g0342000 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D023030 1.4e-08 65.1 198 33.3
Os09g0341500 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D023030 6.8e-08 62.8 292 29.1
Zm00001eb161470 Zea mays HOM05D028964 ORTHO05D049742 1.2e-07 62.0 349 25.5
Zm00001eb098120 Zea mays HOM05D015368 ORTHO05D023030 7.5e-07 59.3 438 24.9
Os09g0323400 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D296723 9.8e-07 58.9 156 31.4
Os09g0341600 Oryza sativa ssp. japonica HOM05D015368 ORTHO05D299837 2.2e-06 57.8 154 30.5
Os07g0517700 Oryza sativa ssp. japonica HOM05D028964 ORTHO05D049742 4.9e-06 56.6 351 24.5


User provided reference genes

Program Settings