Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os09g0525500 Oryza sativa ssp. japonica HOM05D005649 ORTHO05D006837 1.0e-45 186.4 96 100.0
Zm00001eb319020 Zea mays HOM05D005649 ORTHO05D006837 1.1e-18 96.7 73 68.5
PGR042G0682 Punica granatum HOM05D005649 ORTHO05D006837 2.0e-09 65.9 70 47.1
Zm00001eb198610 Zea mays HOM05D005649 ORTHO05D006837 2.0e-09 65.9 92 47.8
Aqoxy7G00428 Aquilegia oxysepala HOM05D005649 ORTHO05D006837 3.4e-09 65.1 87 48.3
CiPaw.04G066700 Carya illinoinensis HOM05D005649 ORTHO05D006837 4.4e-09 64.7 92 42.4
Potri.012G137400 Populus trichocarpa HOM05D005649 ORTHO05D006837 4.4e-09 64.7 88 44.3
CANSAT21G0877 Cannabis sativa HOM05D005649 ORTHO05D006837 7.6e-09 63.9 94 39.4
MELO3C006883.2 Cucumis melo HOM05D005649 ORTHO05D006837 7.6e-09 63.9 84 41.7
Potri.015G139100 Populus trichocarpa HOM05D005649 ORTHO05D006837 2.9e-08 62.0 85 44.7
Sabra15G0150200 Salix brachista HOM05D005649 ORTHO05D006837 2.9e-08 62.0 89 41.6
CsaV3_3G016880 Cucumis sativus L. HOM05D005649 ORTHO05D006837 3.8e-08 61.6 84 40.5
Nn1g01375 Nelumbo nucifera HOM05D005649 ORTHO05D006837 8.4e-08 60.5 92 41.3
Nitab4.5_0002107g0070 Nicotiana tabacum HOM05D005649 ORTHO05D006837 8.4e-08 60.5 87 43.7
Migut.F01138 Erythranthe guttata HOM05D005649 ORTHO05D006837 1.1e-07 60.1 87 40.2
Actinidia03109 Actinidia chinensis HOM05D005649 ORTHO05D006837 1.4e-07 59.7 91 40.7
Eucgr.K00231 Eucalyptus grandis HOM05D005649 ORTHO05D006837 1.4e-07 59.7 97 41.2
SalBow6G0552 Salvia bowleyana HOM05D000001 ORTHO05D010467 1.9e-07 59.3 73 41.1
DCAR_018179 Daucus carota HOM05D005649 ORTHO05D006837 2.4e-07 58.9 90 37.8
SalBow6G6599 Salvia bowleyana HOM05D000001 ORTHO05D010467 2.4e-07 58.9 73 39.7
Cpa.g.sc107.18 Carica papaya HOM05D005649 ORTHO05D006837 3.2e-07 58.5 90 42.2
Ah.07g209060 Amaranthus hybridus HOM05D005649 ORTHO05D006837 4.2e-07 58.2 88 40.9
CAN.G769.4 Capsicum annuum HOM05D005649 ORTHO05D006837 4.2e-07 58.2 91 39.6
SalBow2G3129 Salvia bowleyana HOM05D005649 ORTHO05D006837 4.2e-07 58.2 79 36.7
CSS0017664 Camellia sinensis var. sinensis HOM05D005649 ORTHO05D006837 5.4e-07 57.8 91 38.5
Sed0025700 Sechium edule HOM05D005649 ORTHO05D006837 9.3e-07 57.0 71 43.7
EL10Ac3g05710 Beta vulgaris HOM05D005649 ORTHO05D006837 1.2e-06 56.6 88 40.9
Gohir.A12G260100 Gossypium hirsutum HOM05D005649 ORTHO05D006837 1.2e-06 56.6 87 42.5
COL.COLO4_14273 Corchorus olitorius HOM05D005649 ORTHO05D006837 1.6e-06 56.2 88 44.3
Os08g0546300 Oryza sativa ssp. japonica HOM05D005649 ORTHO05D006837 1.6e-06 56.2 64 43.8
PSO782G2995 Papaver somniferum HOM05D005649 ORTHO05D006837 1.6e-06 56.2 82 42.7
Sed0000609 Sechium edule HOM05D005649 ORTHO05D006837 1.6e-06 56.2 78 42.3
Gohir.D12G260900 Gossypium hirsutum HOM05D005649 ORTHO05D006837 2.1e-06 55.8 87 42.5
Gorai.008G279600 Gossypium raimondii HOM05D005649 ORTHO05D006837 2.1e-06 55.8 87 42.5
THA.LOC109117151 Tarenaya hassleriana HOM05D005649 ORTHO05D006837 2.1e-06 55.8 92 39.1
Aa31LG3G8540 Aethionema arabicum HOM05D005649 ORTHO05D006837 2.7e-06 55.5 80 38.8
MD01G1197500 Malus domestica HOM05D005649 ORTHO05D006837 2.7e-06 55.5 86 38.4
Psat0s6119g0040 Pisum sativum HOM05D005649 ORTHO05D006837 2.7e-06 55.5 86 40.7
Cc02_g03310 Coffea canephora HOM05D005649 ORTHO05D006837 3.5e-06 55.1 86 36.0
CARHR265080 Cardamine hirsuta HOM05D005649 ORTHO05D006837 4.6e-06 54.7 95 37.9
Phvul.004G120100 Phaseolus vulgaris HOM05D005649 ORTHO05D006837 4.6e-06 54.7 88 39.8
Migut.F00365 Erythranthe guttata HOM05D005649 ORTHO05D006837 6.0e-06 54.3 88 38.6
Oeu062770.1 Olea europaea HOM05D005649 ORTHO05D006837 6.0e-06 54.3 84 36.9


User provided reference genes

Program Settings