Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 1.6e-100 369.4 179 100.0
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 3.3e-50 202.2 112 75.0
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 3.7e-49 198.7 105 78.1
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 6.3e-49 198.0 112 74.1
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 8.2e-49 197.6 105 79.0
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 8.2e-49 197.6 104 78.8
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 8.2e-49 197.6 107 78.5
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 1.1e-48 197.2 110 75.5
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 1.4e-48 196.8 111 73.9
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 2.4e-48 196.1 112 74.1
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 2.4e-48 196.1 107 75.7
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 3.1e-48 195.7 116 71.6
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 3.1e-48 195.7 110 73.6
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 4.1e-48 195.3 111 73.9
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 4.1e-48 195.3 105 79.0
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 4.1e-48 195.3 104 77.9
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 5.3e-48 194.9 112 74.1
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 5.3e-48 194.9 112 74.1
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 5.3e-48 194.9 104 78.8
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 6.9e-48 194.5 105 77.1
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 9.0e-48 194.1 112 73.2
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 9.0e-48 194.1 113 72.6
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 1.2e-47 193.7 119 70.6
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 2.0e-47 193.0 104 77.9
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 2.0e-47 193.0 105 77.1
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 2.0e-47 193.0 110 73.6
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 2.6e-47 192.6 104 77.9
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 3.4e-47 192.2 104 77.9
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 3.4e-47 192.2 106 74.5
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 3.4e-47 192.2 105 77.1
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 3.4e-47 192.2 105 76.2
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 4.5e-47 191.8 105 76.2
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 4.5e-47 191.8 104 77.9
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 4.5e-47 191.8 105 77.1
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 7.7e-47 191.0 104 76.9
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 1.7e-46 189.9 104 76.0
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 1.7e-46 189.9 106 76.4
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 2.2e-46 189.5 105 77.1
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 2.2e-46 189.5 105 75.2
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.2e-46 189.5 106 76.4
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 2.9e-46 189.1 105 74.3
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 3.8e-46 188.7 116 67.2
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 5.0e-46 188.3 106 75.5
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 1.4e-45 186.8 104 75.0
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 2.5e-45 186.0 105 73.3
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 4.2e-45 185.3 112 67.0
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 5.5e-45 184.9 105 72.4
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 7.2e-45 184.5 110 70.9
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 7.2e-45 184.5 105 72.4
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 7.2e-45 184.5 105 71.4
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 9.4e-45 184.1 110 70.9
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 1.2e-44 183.7 104 74.0
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 1.2e-44 183.7 120 65.8
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 2.1e-44 183.0 105 72.4
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 2.1e-44 183.0 112 70.5
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.4e-43 180.3 104 70.2
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.1e-42 177.2 104 73.1
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 2.5e-42 176.0 105 69.5
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 1.7e-41 173.3 91 79.1
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 2.0e-39 166.4 116 62.1
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 1.7e-38 163.3 152 50.7
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 3.8e-38 162.2 146 60.3
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 5.0e-38 161.8 88 76.1
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 5.0e-38 161.8 146 60.3
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 2.5e-37 159.5 104 70.2
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 3.6e-36 155.6 100 66.0
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 3.3e-34 149.1 77 80.5
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 3.7e-33 145.6 97 67.0
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 7.0e-32 141.4 76 77.6
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 2.5e-29 132.9 74 73.0
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 1.2e-20 104.0 57 71.9
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 4.1e-16 89.0 51 68.6
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.7e-06 57.0 39 53.8


User provided reference genes

Program Settings