Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os09g0482300 Oryza sativa ssp. japonica HOM05D031961 ORTHO05D006334 3.6e-70 268.1 131 100.0
Os09g0482550 Oryza sativa ssp. japonica HOM05D031961 ORTHO05D006334 3.6e-70 268.1 131 100.0
Zm00001eb316370 Zea mays HOM05D031961 ORTHO05D006334 4.9e-27 124.8 119 59.7
CDE04G1110 Ceratophyllum demersum HOM05D005680 ORTHO05D006334 1.3e-08 63.5 70 45.7
ClCG11G018960 Citrullus lanatus HOM05D005680 ORTHO05D006334 5.1e-08 61.6 95 41.1
Thecc.02G019100 Theobroma cacao HOM05D005680 ORTHO05D006334 2.5e-07 59.3 79 45.6
Atru.chr13.75 Acer truncatum HOM05D005680 ORTHO05D006334 3.3e-07 58.9 113 38.1
BcaC02g07811 Brassica carinata HOM05D005680 ORTHO05D006334 9.7e-07 57.4 64 46.9
C04p63190 Brassica napus HOM05D005680 ORTHO05D006334 9.7e-07 57.4 64 46.9
BcaB06g28712 Brassica carinata HOM05D005680 ORTHO05D006334 1.3e-06 57.0 64 46.9
BcaC01g05829 Brassica carinata HOM05D005680 ORTHO05D006334 1.3e-06 57.0 64 46.9
A04p25910 Brassica napus HOM05D005680 ORTHO05D006334 1.3e-06 57.0 64 46.9
C03p22000 Brassica napus HOM05D005680 ORTHO05D006334 1.3e-06 57.0 64 46.9
BraA04t18094Z Brassica rapa HOM05D005680 ORTHO05D006334 1.3e-06 57.0 64 46.9
Lalb_Chr05g0226041 Lupinus albus HOM05D005680 ORTHO05D006334 1.3e-06 57.0 112 38.4
Thhalv10017732m.g Eutrema salsugineum HOM05D005680 ORTHO05D006334 1.6e-06 56.6 64 46.9
Manes.12G112300 Manihot esculenta HOM05D005680 ORTHO05D006334 1.6e-06 56.6 107 40.2
Sc19g0003710 Simmondsia chinensis HOM05D005680 ORTHO05D006334 1.6e-06 56.6 79 51.9
Sc25g0001410 Simmondsia chinensis HOM05D005680 ORTHO05D006334 1.6e-06 56.6 104 39.4
BcaB01g03924 Brassica carinata HOM05D005680 ORTHO05D006334 2.2e-06 56.2 64 46.9
Duzib052G1168 Durio zibethinus HOM05D005680 ORTHO05D006334 2.2e-06 56.2 58 46.6
HanXRQChr12g0377211 Helianthus annuus HOM05D005680 ORTHO05D006334 2.2e-06 56.2 101 39.6
Sed0000508 Sechium edule HOM05D005680 ORTHO05D006334 2.8e-06 55.8 80 43.8
CANSAT01G2162 Cannabis sativa HOM05D005680 ORTHO05D006334 3.7e-06 55.5 90 41.1
Eucgr.H02278 Eucalyptus grandis HOM05D005680 ORTHO05D006334 4.8e-06 55.1 73 47.9
Glyma.05G103100 Glycine max HOM05D005680 ORTHO05D006334 4.8e-06 55.1 109 40.4
Carub.0004s1530 Capsella rubella HOM05D005680 ORTHO05D006334 6.3e-06 54.7 64 45.3
ClCG01G017300 Citrullus lanatus HOM05D005680 ORTHO05D006334 6.3e-06 54.7 74 45.9
PGR031G2681 Punica granatum HOM05D005680 ORTHO05D006334 6.3e-06 54.7 70 45.7
Ah.03g146390 Amaranthus hybridus HOM05D005680 ORTHO05D006334 8.2e-06 54.3 89 42.7
CAN.G1075.10 Capsicum annuum HOM05D005680 ORTHO05D006334 8.2e-06 54.3 90 41.1
MELO3C017050.2 Cucumis melo HOM05D005680 ORTHO05D006334 8.2e-06 54.3 75 44.0
Sp4g16030 Schrenkiella parvula HOM05D005680 ORTHO05D006334 8.2e-06 54.3 64 45.3


User provided reference genes

Program Settings