Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os09g0443000 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D011084 1.2e-70 270.0 161 100.0
Os08g0461300 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.4e-12 77.0 68 57.4
Os08g0460800 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 5.5e-12 75.1 66 59.1
Os08g0462300 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 7.2e-12 74.7 66 54.5
Zm00001eb295980 Zea mays HOM05D000312 ORTHO05D000221 3.6e-11 72.4 80 53.8
Os08g0461000 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 7.4e-09 64.7 67 52.2
Zm00001eb295990 Zea mays HOM05D000312 ORTHO05D000221 3.7e-08 62.4 50 62.0
Os08g0461700 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 6.3e-08 61.6 62 45.2
Aqoxy6G00975 Aquilegia oxysepala HOM05D000312 ORTHO05D000221 1.4e-07 60.5 65 44.6
Aqoxy5G04271 Aquilegia oxysepala HOM05D000312 ORTHO05D000221 5.3e-07 58.5 65 43.1
Os08g0267800 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 5.3e-07 58.5 55 52.7
MBI15_g27844_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000221 1.6e-06 57.0 68 48.5
Manes.09G147200 Manihot esculenta HOM05D000312 ORTHO05D000221 1.6e-06 57.0 77 36.4
MBI15_g27842_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D011084 2.0e-06 56.6 68 48.5
Os08g0461800 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 2.0e-06 56.6 47 55.3
Medtr1g011430 Medicago truncatula HOM05D000312 ORTHO05D000221 3.5e-06 55.8 72 44.4
MSTRG.24393 Avicennia marina HOM05D000312 ORTHO05D000221 5.9e-06 55.1 45 55.6
Migut.D00672 Erythranthe guttata HOM05D000312 ORTHO05D000221 5.9e-06 55.1 59 47.5
Hma1.2p1_0189F.1_g082790 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 5.9e-06 55.1 73 39.7
Os08g0197000 Oryza sativa ssp. japonica HOM05D000051 ORTHO05D000015 5.9e-06 55.1 73 41.1
Peaxi162Scf00120g00155 Petunia axillaris HOM05D000312 ORTHO05D000221 5.9e-06 55.1 45 57.8
Peaxi162Scf00188g00541 Petunia axillaris HOM05D000312 ORTHO05D000221 5.9e-06 55.1 48 54.2
TWI36G0935 Tripterygium wilfordii HOM05D000312 ORTHO05D000221 5.9e-06 55.1 73 42.5
MBI15_g22822_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000221 7.7e-06 54.7 73 46.6
Peaxi162Scf00121g00119 Petunia axillaris HOM05D000312 ORTHO05D000221 7.7e-06 54.7 71 36.6
Peaxi162Scf00188g00537 Petunia axillaris HOM05D000312 ORTHO05D000221 7.7e-06 54.7 48 56.2


User provided reference genes

Program Settings