Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 6.9e-73 277.3 151 100.0
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 7.4e-35 151.0 118 66.1
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.2e-31 139.4 101 80.2
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.2e-31 139.4 101 80.2
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 6.5e-31 137.9 100 78.0
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-30 137.1 101 77.2
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.4e-30 136.7 100 77.0
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 1.4e-30 136.7 98 81.6
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.9e-30 136.3 101 78.2
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.9e-30 136.3 101 78.2
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 2.5e-30 136.0 125 68.0
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 4.2e-30 135.2 101 78.2
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 5.5e-30 134.8 97 80.4
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 7.2e-30 134.4 101 78.2
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 9.4e-30 134.0 101 80.2
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.2e-29 133.7 138 65.2
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.2e-29 133.7 138 65.2
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.6e-29 133.3 125 64.8
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.6e-29 133.3 138 65.2
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 2.1e-29 132.9 126 66.7
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.1e-29 132.9 93 79.6
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 2.7e-29 132.5 98 78.6
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 2.7e-29 132.5 98 78.6
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 2.7e-29 132.5 101 77.2
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 2.7e-29 132.5 147 62.6
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 3.6e-29 132.1 138 64.5
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 3.6e-29 132.1 138 64.5
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 3.6e-29 132.1 101 78.2
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 3.6e-29 132.1 101 78.2
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 4.6e-29 131.7 142 62.0
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 4.6e-29 131.7 141 64.5
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 4.6e-29 131.7 99 77.8
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 4.6e-29 131.7 101 76.2
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 6.1e-29 131.3 133 62.4
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 7.9e-29 131.0 97 81.4
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 7.9e-29 131.0 101 76.2
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 7.9e-29 131.0 96 79.2
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 1.0e-28 130.6 101 60.4
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.0e-28 130.6 101 76.2
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.0e-28 130.6 101 77.2
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.4e-28 130.2 101 73.3
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.8e-28 129.8 101 75.2
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 1.8e-28 129.8 98 77.6
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 1.8e-28 129.8 101 74.3
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.3e-28 129.4 101 76.2
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 3.0e-28 129.0 101 75.2
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 3.9e-28 128.6 98 76.5
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 3.9e-28 128.6 117 69.2
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 3.9e-28 128.6 97 79.4
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 6.7e-28 127.9 119 68.1
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 6.7e-28 127.9 96 77.1
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 8.8e-28 127.5 128 66.4
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 8.8e-28 127.5 101 74.3
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.1e-27 127.1 103 74.8
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.5e-27 126.7 101 73.3
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.5e-27 126.7 96 79.2
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.6e-27 125.9 101 74.3
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 3.3e-27 125.6 125 64.8
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 3.3e-27 125.6 98 75.5
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 5.7e-27 124.8 97 76.3
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 5.7e-27 124.8 96 78.1
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 5.7e-27 124.8 125 64.0
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 5.7e-27 124.8 98 73.5
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 5.7e-27 124.8 101 75.2
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 7.4e-27 124.4 99 74.7
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 7.4e-27 124.4 96 76.0
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 7.4e-27 124.4 89 80.9
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 7.4e-27 124.4 96 76.0
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 7.4e-27 124.4 96 77.1
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 9.7e-27 124.0 124 65.3
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 9.7e-27 124.0 103 73.8
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 9.7e-27 124.0 111 67.6
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.3e-26 123.6 101 71.3
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 1.7e-26 123.2 96 78.1
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 1.7e-26 123.2 101 75.2
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.2e-26 122.9 128 62.5
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.2e-26 122.9 150 57.3
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 2.8e-26 122.5 100 71.0
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.8e-26 122.5 123 61.8
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 6.3e-26 121.3 125 63.2
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 6.3e-26 121.3 110 69.1
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 8.2e-26 120.9 100 73.0
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.1e-25 120.6 101 73.3
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.8e-25 119.8 90 77.8
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 2.4e-25 119.4 96 75.0
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 2.4e-25 119.4 117 65.8
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 5.3e-25 118.2 117 65.8
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 1.2e-24 117.1 100 70.0
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.2e-24 117.1 100 70.0
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.5e-24 116.7 96 76.0
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.0e-24 116.3 101 71.3
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 2.6e-24 115.9 93 61.3
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 4.5e-24 115.2 95 72.6
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 4.5e-24 115.2 96 74.0
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.7e-23 113.2 136 56.6
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 3.8e-23 112.1 137 56.2
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 6.5e-23 111.3 93 74.2
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 4.2e-22 108.6 119 60.5
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 6.7e-20 101.3 80 76.2
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 9.7e-19 97.4 86 65.1
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 9.7e-19 97.4 75 78.7
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 9.7e-19 97.4 81 71.6
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 2.2e-18 96.3 75 80.0
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 4.1e-17 92.0 75 73.3
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.6e-08 63.5 39 74.4


User provided reference genes

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