Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os09g0421700 Oryza sativa ssp. japonica HOM05D015084 ORTHO05D015160 5.3e-163 577.8 329 100.0
Os09g0421600 Oryza sativa ssp. japonica HOM05D015084 ORTHO05D015160 2.7e-45 186.8 204 52.5
Zm00001eb313050 Zea mays HOM05D015084 ORTHO05D015160 1.5e-27 127.9 331 32.0
Zm00001eb313140 Zea mays HOM05D015084 ORTHO05D015160 3.6e-26 123.2 393 29.0
Zm00001eb313100 Zea mays HOM05D015084 ORTHO05D015160 4.9e-15 86.3 260 29.6
Zm00001eb313060 Zea mays HOM05D031047 ORTHO05D015160 3.0e-12 77.0 294 31.0
Zm00001eb313090 Zea mays HOM05D031047 ORTHO05D015160 3.0e-12 77.0 294 31.0
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 4.3e-11 73.2 157 31.2
Sabra09G0060100 Salix brachista HOM05D000650 ORTHO05D007302 5.6e-11 72.8 201 30.8
DCAR_029285 Daucus carota HOM05D000650 ORTHO05D007302 9.5e-11 72.0 143 34.3
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 1.2e-10 71.6 243 26.3
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 4.0e-09 66.6 90 37.8
Manes.07G043000 Manihot esculenta HOM05D000650 ORTHO05D007302 5.2e-09 66.2 155 30.3
Manes.07G043100 Manihot esculenta HOM05D000650 ORTHO05D015160 6.8e-09 65.9 262 25.6
CDE02G2039 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 5.8e-08 62.8 201 27.4
ECA246G3789 Erigeron canadensis HOM05D005220 ORTHO05D006082 5.8e-08 62.8 174 28.2
Zm00001eb313070 Zea mays HOM05D015084 ORTHO05D015160 2.2e-07 60.8 44 70.5
Nitab4.5_0004586g0030 Nicotiana tabacum HOM05D000650 ORTHO05D007302 2.9e-07 60.5 250 25.2
Thecc.03G097300 Theobroma cacao HOM05D005220 ORTHO05D006082 3.7e-07 60.1 194 26.3
Os08g0441900 Oryza sativa ssp. japonica HOM05D015084 ORTHO05D015160 4.9e-07 59.7 104 30.8
SGA_v2.0_scaffold83G26387 Striga asiatica HOM05D000650 ORTHO05D000735 4.9e-07 59.7 154 27.3
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 6.4e-07 59.3 153 30.7
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 8.3e-07 58.9 138 29.7
vmacro01873 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 8.3e-07 58.9 140 27.9
Zm00001eb313160 Zea mays HOM05D031047 ORTHO05D443559 8.3e-07 58.9 150 28.7
Haze_10696 Corylus avellana HOM05D000650 ORTHO05D007302 1.1e-06 58.5 125 32.8
Manes.10G096200 Manihot esculenta HOM05D000650 ORTHO05D014428 1.1e-06 58.5 198 26.3
Sed0003803 Sechium edule HOM05D005220 ORTHO05D006082 1.4e-06 58.2 238 25.2
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.9e-06 57.8 166 24.7
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 1.9e-06 57.8 196 24.5
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 1.9e-06 57.8 116 28.4
DCAR_001849 Daucus carota HOM05D000650 ORTHO05D007302 2.4e-06 57.4 317 24.6
CDE05G1528 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 3.2e-06 57.0 183 29.0
arahy.Tifrunner.gnm1.ann1.UWUI2N Arachis hypogaea HOM05D005220 ORTHO05D006082 4.1e-06 56.6 154 29.2
arahy.Tifrunner.gnm1.ann1.Y71GGS Arachis hypogaea HOM05D005220 ORTHO05D006082 4.1e-06 56.6 154 27.9
EL10Ac5g11101 Beta vulgaris HOM05D005220 ORTHO05D006082 4.1e-06 56.6 254 24.4
Sed0005854 Sechium edule HOM05D005220 ORTHO05D006082 4.1e-06 56.6 183 26.2
Potri.001G283000 Populus trichocarpa HOM05D000650 ORTHO05D007302 5.4e-06 56.2 247 24.3
VMungo0251G0586 Vigna mungo HOM05D000650 ORTHO05D007302 5.4e-06 56.2 110 30.0
Nn1g05634 Nelumbo nucifera HOM05D000650 ORTHO05D000735 7.1e-06 55.8 226 25.7
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 9.2e-06 55.5 149 26.2
Ciclev10020317m.g Citrus clementina HOM05D005220 ORTHO05D006082 9.2e-06 55.5 242 25.6
Oeu063550.2 Olea europaea HOM05D000650 ORTHO05D007302 9.2e-06 55.5 144 29.2


User provided reference genes

Program Settings