Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 4.3e-170 601.3 316 100.0
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 3.5e-87 325.9 263 58.2
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.0e-86 324.3 263 58.2
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 4.8e-84 315.5 259 58.3
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 4.8e-84 315.5 260 58.5
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 1.8e-83 313.5 265 55.8
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 1.8e-83 313.5 261 55.9
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 3.1e-83 312.8 259 55.6
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 5.3e-83 312.0 257 54.9
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 6.9e-83 311.6 259 55.6
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 1.2e-82 310.8 260 56.9
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 1.2e-82 310.8 264 54.9
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.5e-82 310.5 264 55.7
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 3.4e-82 309.3 264 53.8
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 3.4e-82 309.3 264 55.3
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 4.4e-82 308.9 264 54.5
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 5.8e-82 308.5 267 55.1
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 7.6e-82 308.1 259 55.2
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 1.3e-81 307.4 266 55.6
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 1.3e-81 307.4 264 53.8
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 1.7e-81 307.0 264 55.3
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 4.9e-81 305.4 257 56.0
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 4.9e-81 305.4 265 56.6
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 4.9e-81 305.4 264 56.1
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 6.4e-81 305.1 259 55.6
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 1.1e-80 304.3 266 55.3
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.1e-80 304.3 269 57.2
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 1.1e-80 304.3 269 57.2
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 5.4e-80 302.0 259 54.8
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 5.4e-80 302.0 259 54.8
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 7.1e-80 301.6 256 55.1
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 2.1e-79 300.1 264 54.9
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 2.7e-79 299.7 259 56.0
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 2.7e-79 299.7 262 54.6
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 2.7e-79 299.7 262 54.6
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 3.5e-79 299.3 260 53.5
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 3.5e-79 299.3 258 53.9
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 4.6e-79 298.9 263 53.6
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 6.0e-79 298.5 259 54.4
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 6.0e-79 298.5 257 54.1
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 7.8e-79 298.1 265 55.5
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 1.0e-78 297.7 252 56.3
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.3e-78 297.4 262 53.8
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 1.7e-78 297.0 265 54.3
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 2.3e-78 296.6 254 55.5
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 2.3e-78 296.6 254 55.5
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 3.0e-78 296.2 263 54.4
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 5.1e-78 295.4 254 55.1
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 5.1e-78 295.4 267 54.3
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 8.7e-78 294.7 254 55.1
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 1.5e-77 293.9 263 52.5
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 1.5e-77 293.9 263 52.1
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 1.9e-77 293.5 256 54.7
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 2.5e-77 293.1 265 51.7
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 4.3e-77 292.4 273 52.4
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 4.3e-77 292.4 263 51.7
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 7.3e-77 291.6 253 54.2
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 7.3e-77 291.6 251 56.6
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 7.3e-77 291.6 256 55.5
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 1.3e-76 290.8 252 52.8
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.6e-76 290.4 265 51.3
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 1.6e-76 290.4 257 51.4
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 4.8e-76 288.9 266 51.9
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 6.2e-76 288.5 262 52.3
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 6.2e-76 288.5 260 50.0
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 1.1e-75 287.7 250 54.4
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 1.8e-75 287.0 263 53.6
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 2.4e-75 286.6 263 53.2
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 3.1e-75 286.2 265 51.7
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 1.2e-74 284.3 260 53.1
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 1.5e-74 283.9 286 49.0
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 1.5e-74 283.9 259 52.5
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 1.5e-74 283.9 270 51.1
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 2.0e-74 283.5 259 52.1
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 3.4e-74 282.7 270 50.7
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.8e-74 282.0 269 50.2
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 5.8e-74 282.0 267 50.2
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 5.8e-74 282.0 264 50.8
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 7.6e-74 281.6 258 53.1
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 9.9e-74 281.2 258 51.9
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 2.4e-72 276.6 267 49.1
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 1.6e-71 273.9 242 54.1
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 6.0e-71 271.9 313 45.0
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 7.9e-71 271.6 274 49.3
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 2.5e-69 266.5 258 51.2
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 5.6e-69 265.4 211 58.3
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 1.6e-68 263.8 240 52.9
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 1.4e-67 260.8 264 50.8
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 1.4e-67 260.8 235 54.9
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 5.3e-67 258.8 249 51.0
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 2.6e-66 256.5 247 49.8
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 2.6e-66 256.5 250 50.8
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 3.4e-66 256.1 204 70.6
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 7.6e-66 255.0 252 48.8
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 1.0e-65 254.6 254 48.8
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 1.0e-65 254.6 242 52.5
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 1.7e-65 253.8 265 46.8
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 6.5e-65 251.9 240 50.0
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 8.4e-65 251.5 258 46.5
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 1.4e-64 250.8 229 53.7
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 5.5e-64 248.8 267 45.3
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 1.6e-63 247.3 229 52.0
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 2.7e-63 246.5 260 47.7
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 6.0e-63 245.4 297 43.4
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.3e-62 244.2 268 44.8
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 3.0e-62 243.0 290 42.8
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 1.3e-60 237.7 326 38.0
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 8.4e-57 224.9 247 48.2
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 3.5e-55 219.5 269 38.3
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 1.0e-54 218.0 263 44.1
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 5.1e-54 215.7 195 56.4
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 5.9e-50 202.2 213 46.0
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 5.9e-50 202.2 213 46.0
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.4e-48 197.6 215 46.5
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 3.2e-48 196.4 202 48.5
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.2e-48 196.1 215 46.5
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 5.7e-45 185.7 217 43.3
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 5.7e-45 185.7 186 49.5
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.4e-43 181.0 195 47.2
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 2.4e-43 180.3 417 28.8
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.3e-43 179.1 257 38.9
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 9.1e-43 178.3 122 66.4
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 3.2e-40 169.9 242 35.5
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.0e-38 164.9 281 35.9
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 8.2e-36 155.2 153 49.0
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 1.3e-33 147.9 354 31.1
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 3.8e-33 146.4 134 50.7
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 1.4e-27 127.9 293 31.1
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 9.1e-27 125.2 148 41.9
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 7.7e-26 122.1 380 25.8
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 2.2e-25 120.6 148 41.2
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 2.5e-24 117.1 94 55.3
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 5.5e-24 115.9 128 45.3
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 9.8e-21 105.1 169 40.8
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 1.7e-20 104.4 120 44.2
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 1.1e-19 101.7 136 43.4
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 2.7e-18 97.1 199 33.2
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 6.5e-17 92.4 51 72.5
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.5e-16 91.3 51 68.6
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.5e-16 90.5 52 73.1
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 4.0e-14 83.2 50 68.0
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 3.1e-11 73.6 116 37.1
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 1.4e-06 58.2 36 58.3
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 1.4e-06 58.2 36 58.3
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.4e-06 58.2 41 61.0
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 3.0e-06 57.0 37 56.8
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 6.8e-06 55.8 32 75.0


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