Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0530500 Oryza sativa ssp. japonica HOM05D004830 ORTHO05D005310 3.7e-109 398.3 208 100.0
Actinidia08868 Actinidia chinensis HOM05D004830 ORTHO05D005310 3.5e-51 205.7 189 60.3
Migut.I00505 Erythranthe guttata HOM05D004830 ORTHO05D005310 4.6e-51 205.3 187 57.8
Cfa018828 Carpinus fangiana HOM05D004830 ORTHO05D005310 6.0e-51 204.9 196 58.2
MSTRG.11282 Avicennia marina HOM05D004830 ORTHO05D005310 1.0e-50 204.1 187 58.3
Manes.14G051600 Manihot esculenta HOM05D004830 ORTHO05D005310 2.3e-50 203.0 185 62.7
TAR622G0015 Trochodendron aralioides HOM05D004830 ORTHO05D005310 3.0e-50 202.6 190 58.4
CSS0034026 Camellia sinensis var. sinensis HOM05D004830 ORTHO05D005310 3.9e-50 202.2 189 57.7
Oeu056012.1 Olea europaea HOM05D004830 ORTHO05D005310 1.9e-49 199.9 188 57.4
CiPaw.11G008200 Carya illinoinensis HOM05D004830 ORTHO05D005310 4.3e-49 198.7 196 57.1
Rhsim12G0174200 Rhododendron simsii HOM05D004830 ORTHO05D005310 4.3e-49 198.7 183 60.1
Atru.chr9.1044 Acer truncatum HOM05D004830 ORTHO05D005310 5.6e-49 198.4 188 60.6
ATR0561G210 Amborella trichopoda HOM05D004830 ORTHO05D005310 7.3e-49 198.0 197 57.9
QL10p003269 Quercus lobata HOM05D004830 ORTHO05D005310 9.5e-49 197.6 188 58.0
RcHm_v2.0_Chr7g0190301 Rosa chinensis HOM05D004830 ORTHO05D005310 1.2e-48 197.2 190 56.8
Prupe.5G151800 Prunus persica HOM05D004830 ORTHO05D005310 2.1e-48 196.4 187 56.7
Thecc.03G128400 Theobroma cacao HOM05D004830 ORTHO05D005310 2.8e-48 196.1 184 58.2
Lj5A97T92 Lonicera japonica HOM05D004830 ORTHO05D005310 4.7e-48 195.3 189 57.7
GSVIVG01008536001 Vitis vinifera HOM05D004830 ORTHO05D005310 8.0e-48 194.5 195 57.4
Cpa.g.sc13.124 Carica papaya HOM05D004830 ORTHO05D005310 1.8e-47 193.4 182 58.2
Ciclev10022323m.g Citrus clementina HOM05D004830 ORTHO05D005310 1.8e-47 193.4 191 55.5
Peaxi162Scf00536g00113 Petunia axillaris HOM05D004830 ORTHO05D005310 1.8e-47 193.4 192 54.2
Duzib084G0035 Durio zibethinus HOM05D004830 ORTHO05D005310 2.3e-47 193.0 187 56.7
Nitab4.5_0002855g0030 Nicotiana tabacum HOM05D004830 ORTHO05D005310 1.2e-46 190.7 183 56.3
QL10p003237 Quercus lobata HOM05D004830 ORTHO05D005310 2.0e-46 189.9 183 56.8
MD06G1142500 Malus domestica HOM05D004830 ORTHO05D005310 2.6e-46 189.5 190 54.2
Aqoxy7G00964 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 9.8e-46 187.6 188 55.3
FAN13G1978 Fragaria x ananassa HOM05D004830 ORTHO05D005310 9.8e-46 187.6 191 55.5
ATR0332G003 Amborella trichopoda HOM05D004830 ORTHO05D005310 1.7e-45 186.8 197 55.8
Aqoxy5G03391 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 1.7e-45 186.8 183 56.3
COL.COLO4_28101 Corchorus olitorius HOM05D004830 ORTHO05D005310 2.2e-45 186.4 183 56.8
Eucgr.K02732 Eucalyptus grandis HOM05D004830 ORTHO05D005310 2.2e-45 186.4 184 57.6
Potri.012G097200 Populus trichocarpa HOM05D004830 ORTHO05D005310 2.2e-45 186.4 196 54.1
QL10p003210 Quercus lobata HOM05D004830 ORTHO05D005310 2.9e-45 186.0 188 55.3
Lj1g0026153 Lotus japonicus HOM05D004830 ORTHO05D005310 8.3e-45 184.5 181 54.7
Gohir.A03G052400 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.4e-44 183.7 186 55.9
CDE02G3469 Ceratophyllum demersum HOM05D004830 ORTHO05D005310 1.9e-44 183.3 196 52.6
Nitab4.5_0002062g0020 Nicotiana tabacum HOM05D004830 ORTHO05D005310 3.2e-44 182.6 178 54.5
FvH4_5g08220 Fragaria vesca HOM05D004830 ORTHO05D005310 5.4e-44 181.8 191 54.5
FAN18G1516 Fragaria x ananassa HOM05D004830 ORTHO05D005310 5.4e-44 181.8 191 54.5
Ca_24504_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 7.0e-44 181.4 179 53.6
Gorai.003G121000 Gossypium raimondii HOM05D004830 ORTHO05D005310 7.0e-44 181.4 186 55.9
arahy.Tifrunner.gnm1.ann1.CC2DBD Arachis hypogaea HOM05D004830 ORTHO05D005310 1.2e-43 180.6 186 52.2
Lsat_1_v5_gn_4_80120 Lactuca sativa HOM05D004830 ORTHO05D005310 7.8e-43 177.9 179 56.4
PGR044G2645 Punica granatum HOM05D004830 ORTHO05D005310 1.0e-42 177.6 184 54.9
arahy.Tifrunner.gnm1.ann1.228PAQ Arachis hypogaea HOM05D004830 ORTHO05D005310 3.9e-42 175.6 186 51.6
FAN08G1417 Fragaria x ananassa HOM05D004830 ORTHO05D005310 3.9e-42 175.6 191 52.4
MBI13_g01839_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 3.9e-42 175.6 139 65.5
Medtr3g089170 Medicago truncatula HOM05D004830 ORTHO05D005310 3.9e-42 175.6 181 53.0
Glyma.04G195400 Glycine max HOM05D004830 ORTHO05D005310 6.6e-42 174.9 190 50.0
VMungo1309G0155 Vigna mungo HOM05D004830 ORTHO05D005310 6.6e-42 174.9 181 51.9
unitig_8.g3032 Utricularia gibba HOM05D004830 ORTHO05D005310 8.6e-42 174.5 181 54.1
vmacro16674 Vaccinium macrocarpon HOM05D004830 ORTHO05D005310 8.6e-42 174.5 165 58.2
Lalb_Chr11g0069591 Lupinus albus HOM05D004830 ORTHO05D005310 1.1e-41 174.1 190 50.0
PSO063G3292 Papaver somniferum HOM05D004830 ORTHO05D005310 1.1e-41 174.1 194 51.5
Glyma.06G170600 Glycine max HOM05D004830 ORTHO05D005310 1.5e-41 173.7 197 49.2
ECA232G3637 Erigeron canadensis HOM05D004830 ORTHO05D005310 1.9e-41 173.3 187 50.3
PSO782G4089 Papaver somniferum HOM05D004830 ORTHO05D005310 1.9e-41 173.3 188 52.7
Phvul.009G166700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 2.1e-40 169.9 190 50.5
HanXRQChr09g0273121 Helianthus annuus HOM05D004830 ORTHO05D005310 2.8e-40 169.5 175 53.7
Cc00_g11930 Coffea canephora HOM05D004830 ORTHO05D005310 1.1e-39 167.5 187 49.7
Zm00001eb036570 Zea mays HOM05D004830 ORTHO05D005310 6.8e-39 164.9 244 44.7
MBI11_g07465_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 6.0e-35 151.8 139 59.7
Haze_07222 Corylus avellana HOM05D004830 ORTHO05D005310 5.6e-33 145.2 173 49.1
SEGI_37187 Sequoiadendron giganteum HOM05D004830 ORTHO05D005310 2.0e-30 136.7 109 58.7
Nn7g37285 Nelumbo nucifera HOM05D004830 ORTHO05D005310 2.1e-27 126.7 173 38.7
ATR0307G071 Amborella trichopoda HOM05D004830 ORTHO05D005310 2.5e-25 119.8 117 48.7
Nn3g16476 Nelumbo nucifera HOM05D004830 ORTHO05D005310 3.3e-25 119.4 188 42.0
arahy.Tifrunner.gnm1.ann1.TSAG7F Arachis hypogaea HOM05D004830 ORTHO05D005310 4.7e-24 115.5 208 35.6
TAR633G1142 Trochodendron aralioides HOM05D004830 ORTHO05D005310 1.8e-23 113.6 106 49.1
COL.COLO4_33470 Corchorus olitorius HOM05D004830 ORTHO05D005310 2.2e-21 106.7 109 45.9
GSVIVG01029897001 Vitis vinifera HOM05D004830 ORTHO05D005310 2.2e-21 106.7 110 44.5
Gohir.D11G237500 Gossypium hirsutum HOM05D004830 ORTHO05D005310 2.9e-21 106.3 117 46.2
Gorai.007G250900 Gossypium raimondii HOM05D004830 ORTHO05D005310 2.9e-21 106.3 117 46.2
Dinv23140 Davidia involucrata HOM05D004830 ORTHO05D005310 3.8e-21 105.9 119 50.4
Gohir.A11G224212 Gossypium hirsutum HOM05D004830 ORTHO05D005310 3.8e-21 105.9 113 46.9
PSO591G0293 Papaver somniferum HOM05D004830 ORTHO05D005310 8.4e-21 104.8 104 48.1
Haze_20367 Corylus avellana HOM05D004830 ORTHO05D005310 1.4e-20 104.0 240 30.4
Dinv14555 Davidia involucrata HOM05D004830 ORTHO05D005310 1.4e-20 104.0 104 46.2
Migut.J01591 Erythranthe guttata HOM05D004830 ORTHO05D005310 2.4e-20 103.2 109 47.7
Aqoxy2G00040 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 4.2e-20 102.4 133 42.9
PSO832G0423 Papaver somniferum HOM05D004830 ORTHO05D005310 5.4e-20 102.1 104 46.2
Cpa.g.sc73.42 Carica papaya HOM05D004830 ORTHO05D005310 7.1e-20 101.7 109 43.1
RcHm_v2.0_Chr3g0495501 Rosa chinensis HOM05D004830 ORTHO05D005310 7.1e-20 101.7 210 33.3
Thecc.05G236700 Theobroma cacao HOM05D004830 ORTHO05D005310 9.3e-20 101.3 109 44.0
MBI19_g09302_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 1.2e-19 100.9 107 40.2
MBI19_g15087_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 1.2e-19 100.9 107 40.2
Manes.08G155600 Manihot esculenta HOM05D004830 ORTHO05D005310 3.5e-19 99.4 104 43.3
Prupe.1G058500 Prunus persica HOM05D004830 ORTHO05D005310 1.0e-18 97.8 183 35.5
TWI34G0970 Tripterygium wilfordii HOM05D004830 ORTHO05D005310 1.0e-18 97.8 257 28.0
Duzib106G0998 Durio zibethinus HOM05D004830 ORTHO05D005310 1.3e-18 97.4 256 29.7
MSTRG.6264 Avicennia marina HOM05D004830 ORTHO05D005310 1.7e-18 97.1 109 44.0
Atru.chr2.1607 Acer truncatum HOM05D004830 ORTHO05D005310 5.1e-18 95.5 227 31.3
CiPaw.09G053100 Carya illinoinensis HOM05D004830 ORTHO05D005310 8.7e-18 94.7 244 29.1
FvH4_1g29410 Fragaria vesca HOM05D004830 ORTHO05D005310 1.1e-17 94.4 218 31.2
FAN28G2201 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.1e-17 94.4 104 43.3
FAN19G2808 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.5e-17 94.0 218 31.2
Potri.013G068900 Populus trichocarpa HOM05D004830 ORTHO05D005310 1.9e-17 93.6 246 29.3
QL07p015956 Quercus lobata HOM05D004830 ORTHO05D005310 1.9e-17 93.6 110 40.0
Ciclev10032343m.g Citrus clementina HOM05D004830 ORTHO05D005310 3.3e-17 92.8 104 42.3
FAN26G1469 Fragaria x ananassa HOM05D004830 ORTHO05D005310 3.3e-17 92.8 104 42.3
Gohir.D06G037550 Gossypium hirsutum HOM05D004830 ORTHO05D005310 3.3e-17 92.8 129 44.2
Lalb_Chr22g0358351 Lupinus albus HOM05D004830 ORTHO05D005310 4.3e-17 92.4 265 27.2
PGR042G2697 Punica granatum HOM05D004830 ORTHO05D005310 7.3e-17 91.7 110 39.1
MD14G1012800 Malus domestica HOM05D004830 ORTHO05D005310 2.1e-16 90.1 235 30.2
Sabra13G0059800 Salix brachista HOM05D004830 ORTHO05D005310 4.8e-16 89.0 246 28.0
Psat3g084280 Pisum sativum HOM05D004830 ORTHO05D005310 8.1e-16 88.2 249 29.7
Glyma.19G121200 Glycine max HOM05D004830 ORTHO05D005310 2.4e-15 86.7 233 27.5
TPR.G23653 Trifolium pratense HOM05D004830 ORTHO05D005310 2.4e-15 86.7 104 39.4
Prupe.7G025800 Prunus persica HOM05D004830 ORTHO05D005310 5.3e-15 85.5 120 38.3
Lj1g0023159 Lotus japonicus HOM05D004830 ORTHO05D005310 1.2e-14 84.3 263 26.6
Gohir.D03G114700 Gossypium hirsutum HOM05D004830 ORTHO05D005310 2.6e-14 83.2 112 48.2
Eucgr.A02163 Eucalyptus grandis HOM05D004830 ORTHO05D005310 4.5e-14 82.4 126 37.3
RhsimUnG0023100 Rhododendron simsii HOM05D004830 ORTHO05D005310 7.6e-14 81.6 129 33.3
Ca_03431_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 1.3e-13 80.9 97 38.1
TPR.G26134 Trifolium pratense HOM05D004830 ORTHO05D005310 1.7e-13 80.5 58 63.8
Medtr7g087480 Medicago truncatula HOM05D004830 ORTHO05D005310 9.3e-12 74.7 99 38.4
VMungo1383G2348 Vigna mungo HOM05D004830 ORTHO05D005310 1.6e-11 73.9 105 37.1
Phvul.001G101700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 7.9e-11 71.6 230 27.0
Gohir.D08G162001 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.0e-10 71.2 59 57.6
TPR.G26160 Trifolium pratense HOM05D004830 ORTHO05D005310 4.8e-08 62.4 134 33.6
AagrBONN_evm.TU.Sc2ySwM_344.609 Anthoceros agrestis HOM05D004830 ORTHO05D005310 6.2e-08 62.0 119 31.9
Cfa019887 Carpinus fangiana HOM05D004830 ORTHO05D005310 1.1e-07 61.2 100 33.0


User provided reference genes

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