Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0519900 Oryza sativa ssp. japonica HOM05D000139 ORTHO05D009860 3.9e-132 474.9 263 100.0
Zm00001eb035690 Zea mays HOM05D000139 ORTHO05D009860 7.5e-83 311.2 268 72.8
PGR083G0847 Punica granatum HOM05D000139 ORTHO05D009860 7.8e-32 141.7 263 37.6
Eucgr.F00089 Eucalyptus grandis HOM05D000139 ORTHO05D009860 2.8e-29 133.3 209 45.5
Lsat_1_v5_gn_1_24441 Lactuca sativa HOM05D000139 ORTHO05D009860 5.2e-28 129.0 254 37.4
Aqoxy1G03696 Aquilegia oxysepala HOM05D000139 ORTHO05D009860 2.6e-27 126.7 206 43.7
MBI16_g02460_MAGBIO Magnolia biondii HOM05D000139 ORTHO05D009860 4.4e-27 125.9 203 41.4
Cc10_g05030 Coffea canephora HOM05D000139 ORTHO05D009860 5.8e-27 125.6 255 36.5
Phvul.001G028400 Phaseolus vulgaris HOM05D000139 ORTHO05D009860 5.8e-27 125.6 261 37.2
Medtr1g017910 Medicago truncatula HOM05D000139 ORTHO05D009860 7.6e-27 125.2 261 35.2
CSS0038143 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D009860 1.3e-26 124.4 269 36.1
DCAR_009877 Daucus carota HOM05D000139 ORTHO05D009860 2.9e-26 123.2 260 36.2
HanXRQChr04g0102781 Helianthus annuus HOM05D000139 ORTHO05D009860 2.9e-26 123.2 260 36.2
GSVIVG01009336001 Vitis vinifera HOM05D000139 ORTHO05D009860 2.9e-26 123.2 254 35.0
Actinidia10203 Actinidia chinensis HOM05D000139 ORTHO05D009860 1.1e-25 121.3 256 34.8
CANSAT25G0555 Cannabis sativa HOM05D000139 ORTHO05D009860 1.9e-25 120.6 219 39.7
Cpa.g.sc142.35 Carica papaya HOM05D000139 ORTHO05D009860 1.9e-25 120.6 257 37.0
VMungo0647G0592 Vigna mungo HOM05D000139 ORTHO05D009860 1.9e-25 120.6 263 35.7
Ca_13212_v3 Cicer arietinum L. HOM05D000139 ORTHO05D009860 3.2e-25 119.8 261 34.9
Dinv44949 Davidia involucrata HOM05D000139 ORTHO05D009860 5.4e-25 119.0 257 35.0
ECA247G2543 Erigeron canadensis HOM05D000139 ORTHO05D009860 9.3e-25 118.2 256 33.6
TPR.G13114 Trifolium pratense HOM05D000139 ORTHO05D009860 9.3e-25 118.2 261 34.5
Actinidia22698 Actinidia chinensis HOM05D000139 ORTHO05D009860 1.6e-24 117.5 258 34.5
Migut.N02787 Erythranthe guttata HOM05D000139 ORTHO05D009860 1.6e-24 117.5 256 36.7
Psat6g017800 Pisum sativum HOM05D000139 ORTHO05D009860 1.6e-24 117.5 261 34.1
Manes.05G182300 Manihot esculenta HOM05D000139 ORTHO05D009860 6.0e-24 115.5 239 36.8
RcHm_v2.0_Chr6g0309751 Rosa chinensis HOM05D000139 ORTHO05D009860 6.0e-24 115.5 212 39.2
Thecc.08G087900 Theobroma cacao HOM05D000139 ORTHO05D009860 6.0e-24 115.5 255 35.3
Lj8A592G30 Lonicera japonica HOM05D000139 ORTHO05D009860 7.8e-24 115.2 145 45.5
arahy.Tifrunner.gnm1.ann1.8JVH3I Arachis hypogaea HOM05D000139 ORTHO05D009860 1.3e-23 114.4 223 38.1
Duzib116G0691 Durio zibethinus HOM05D000139 ORTHO05D009860 1.3e-23 114.4 255 34.9
PSO541G1302 Papaver somniferum HOM05D000139 ORTHO05D009860 1.7e-23 114.0 265 35.1
TWI12G0565 Tripterygium wilfordii HOM05D000139 ORTHO05D009860 1.7e-23 114.0 255 34.5
Gohir.A05G210500 Gossypium hirsutum HOM05D000139 ORTHO05D009860 2.3e-23 113.6 255 34.1
Gohir.D05G213800 Gossypium hirsutum HOM05D000139 ORTHO05D009860 2.3e-23 113.6 255 34.1
CiPaw.07G174100 Carya illinoinensis HOM05D000139 ORTHO05D009860 3.0e-23 113.2 263 35.4
COL.COLO4_28495 Corchorus olitorius HOM05D000139 ORTHO05D009860 3.0e-23 113.2 255 34.9
Potri.014G015500 Populus trichocarpa HOM05D000139 ORTHO05D009860 3.0e-23 113.2 258 34.1
Oeu040433.1 Olea europaea HOM05D000139 ORTHO05D009860 5.1e-23 112.5 203 38.4
FAN20G0592 Fragaria x ananassa HOM05D000139 ORTHO05D009860 6.6e-23 112.1 261 34.5
FAN15G1399 Fragaria x ananassa HOM05D000139 ORTHO05D009860 8.7e-23 111.7 261 34.9
Oeu053623.1 Olea europaea HOM05D000139 ORTHO05D009860 8.7e-23 111.7 254 35.4
Duzib093G0841 Durio zibethinus HOM05D000139 ORTHO05D009860 1.1e-22 111.3 260 35.4
PSO675G3129 Papaver somniferum HOM05D000139 ORTHO05D009860 1.1e-22 111.3 265 35.5
FvH4_2g32950 Fragaria vesca HOM05D000139 ORTHO05D009860 1.5e-22 110.9 260 34.2
FAN24G2136 Fragaria x ananassa HOM05D000139 ORTHO05D009860 1.5e-22 110.9 260 34.2
Gorai.009G220500 Gossypium raimondii HOM05D000139 ORTHO05D009860 1.5e-22 110.9 255 33.7
Oeu053622.1 Olea europaea HOM05D000139 ORTHO05D009860 1.9e-22 110.5 254 35.0
TAR381G0063 Trochodendron aralioides HOM05D000139 ORTHO05D009860 3.3e-22 109.8 257 33.5
Ciclev10003655m.g Citrus clementina HOM05D000139 ORTHO05D009860 5.6e-22 109.0 264 34.8
FAN27G3023 Fragaria x ananassa HOM05D000139 ORTHO05D009860 5.6e-22 109.0 261 34.5
Nitab4.5_0003725g0060 Nicotiana tabacum HOM05D000139 ORTHO05D009860 5.6e-22 109.0 260 32.7
Peaxi162Scf00081g02225 Petunia axillaris HOM05D000139 ORTHO05D009860 7.3e-22 108.6 265 33.6
TAR381G0880 Trochodendron aralioides HOM05D000139 ORTHO05D009860 7.3e-22 108.6 257 33.5
QL05p065465 Quercus lobata HOM05D000139 ORTHO05D009860 1.3e-21 107.8 257 34.6
Glyma.14G089030 Glycine max HOM05D000139 ORTHO05D009860 2.8e-21 106.7 259 34.7
QL12p038183 Quercus lobata HOM05D000139 ORTHO05D009860 2.8e-21 106.7 257 34.2
ClCG08G016550 Citrullus lanatus HOM05D000139 ORTHO05D009860 3.6e-21 106.3 257 33.1
Sopen04g031370 Solanum pennellii HOM05D000139 ORTHO05D009860 3.6e-21 106.3 266 32.3
CAN.G724.33 Capsicum annuum HOM05D000139 ORTHO05D009860 1.4e-20 104.4 262 31.3
Solyc04g077760.1 Solanum lycopersicum HOM05D000139 ORTHO05D009860 1.8e-20 104.0 266 32.0
Haze_22428 Corylus avellana HOM05D000139 ORTHO05D009860 6.9e-20 102.1 260 33.1
Haze_22439 Corylus avellana HOM05D000139 ORTHO05D009860 6.9e-20 102.1 260 33.1
Glyma.17G234500 Glycine max HOM05D000139 ORTHO05D009860 6.9e-20 102.1 253 33.2
CsaV3_2G026060 Cucumis sativus L. HOM05D000139 ORTHO05D009860 4.5e-19 99.4 257 31.9
MELO3C010799.2 Cucumis melo HOM05D000139 ORTHO05D009860 5.8e-19 99.0 257 31.9
ATR0739G173 Amborella trichopoda HOM05D000139 ORTHO05D009860 1.1e-17 94.7 218 34.4
Prupe.1G422000 Prunus persica HOM05D000139 ORTHO05D009860 3.2e-17 93.2 261 32.6
Lj5g0020462 Lotus japonicus HOM05D000139 ORTHO05D009860 4.2e-17 92.8 260 32.3
arahy.Tifrunner.gnm1.ann1.3URM83 Arachis hypogaea HOM05D005715 ORTHO05D009860 6.0e-16 89.0 111 47.7
Sed0025838 Sechium edule HOM05D000139 ORTHO05D009860 1.3e-15 87.8 258 30.2
MD08G1081000 Malus domestica HOM05D000139 ORTHO05D009860 1.1e-14 84.7 263 30.8
Nitab4.5_0000497g0160 Nicotiana tabacum HOM05D000139 ORTHO05D009860 6.2e-13 79.0 241 30.3
MD15G1068000 Malus domestica HOM05D000139 ORTHO05D009860 8.1e-13 78.6 204 33.3
Hma1.2p1_0819F.1_g223610 Hydrangea macrophylla HOM05D000139 ORTHO05D009860 4.0e-12 76.3 194 31.4
Atru.chr13.840 Acer truncatum HOM05D000139 ORTHO05D009860 1.2e-11 74.7 81 53.1


User provided reference genes

Program Settings