Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0513300 Oryza sativa ssp. japonica HOM05D003094 ORTHO05D003482 1.0e-200 703.4 390 100.0
Zm00001eb143930 Zea mays HOM05D003094 ORTHO05D003482 1.1e-154 550.4 343 80.5
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 5.8e-132 474.9 337 69.1
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 2.9e-131 472.6 337 67.7
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 1.1e-130 470.7 337 68.8
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 1.2e-129 467.2 337 68.8
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 4.6e-129 465.3 337 68.0
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 5.1e-128 461.8 337 68.0
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 1.4e-125 453.8 333 67.0
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 3.1e-125 452.6 332 66.9
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 5.2e-125 451.8 339 66.1
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 6.8e-125 451.4 333 67.3
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 8.9e-125 451.1 338 66.0
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 8.9e-125 451.1 337 66.8
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 1.5e-124 450.3 337 65.3
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.5e-124 450.3 337 65.3
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.6e-124 449.5 337 66.8
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 3.4e-124 449.1 339 64.3
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 4.4e-124 448.7 340 65.9
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 1.3e-123 447.2 337 66.5
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 1.3e-123 447.2 339 64.3
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 1.3e-123 447.2 337 66.8
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 2.2e-123 446.4 336 66.1
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 2.2e-123 446.4 337 65.0
Lj9A424T34 Lonicera japonica HOM05D003094 ORTHO05D003482 2.2e-123 446.4 332 66.6
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 2.9e-123 446.0 335 66.3
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 4.9e-123 445.3 337 65.9
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.9e-123 445.3 337 66.2
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 8.4e-123 444.5 333 66.1
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 8.4e-123 444.5 332 65.1
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 1.1e-122 444.1 333 66.7
Cpa.g.sc51.5 Carica papaya HOM05D003094 ORTHO05D003482 1.9e-122 443.4 338 65.4
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 1.9e-122 443.4 340 65.3
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 1.9e-122 443.4 337 64.4
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 2.4e-122 443.0 335 64.5
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 3.2e-122 442.6 332 66.0
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 3.2e-122 442.6 337 65.3
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 5.4e-122 441.8 340 64.4
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 5.4e-122 441.8 333 65.2
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 5.4e-122 441.8 333 65.2
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 7.1e-122 441.4 337 65.0
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 9.3e-122 441.0 337 64.1
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 1.2e-121 440.7 336 64.6
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.2e-121 440.7 337 65.6
BolC5t33491H Brassica oleracea HOM05D003094 ORTHO05D003482 1.6e-121 440.3 336 64.3
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 2.1e-121 439.9 339 63.1
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 2.1e-121 439.9 333 65.5
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 2.1e-121 439.9 336 64.3
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 2.7e-121 439.5 336 64.3
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 3.5e-121 439.1 333 64.9
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 6.0e-121 438.3 333 64.9
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 6.0e-121 438.3 338 64.8
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 7.8e-121 438.0 337 63.5
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.0e-120 437.6 337 65.9
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 1.3e-120 437.2 337 64.7
Migut.D00778 Erythranthe guttata HOM05D003094 ORTHO05D003482 2.3e-120 436.4 335 65.7
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 3.0e-120 436.0 337 63.8
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 3.9e-120 435.6 337 63.2
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 6.6e-120 434.9 337 63.2
SGA_v2.0_scaffold29G12062 Striga asiatica HOM05D003094 ORTHO05D003482 6.6e-120 434.9 332 66.0
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 2.5e-119 433.0 337 64.1
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 2.5e-119 433.0 332 64.8
Solyc03g119170.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 9.6e-119 431.0 337 63.5
Sopen03g038060 Solanum pennellii HOM05D003094 ORTHO05D003482 1.3e-118 430.6 337 63.5
PGSC0003DMG402005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 1.3e-118 430.6 337 63.5
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 3.6e-118 429.1 332 64.2
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 4.8e-118 428.7 332 63.9
HPP92_008848 Vanilla planifolia HOM05D003094 ORTHO05D003482 6.2e-118 428.3 332 64.5
arahy.Tifrunner.gnm1.ann1.D1K70W Arachis hypogaea HOM05D003094 ORTHO05D003482 8.1e-118 427.9 335 63.9
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 8.1e-118 427.9 337 61.4
CAN.G1129.13 Capsicum annuum HOM05D003094 ORTHO05D003482 1.1e-117 427.6 332 63.0
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 1.4e-117 427.2 340 62.9
arahy.Tifrunner.gnm1.ann1.2IG2A1 Arachis hypogaea HOM05D003094 ORTHO05D003482 1.8e-117 426.8 335 63.9
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 3.1e-117 426.0 337 63.5
CARHR093590 Cardamine hirsuta HOM05D003094 ORTHO05D003482 4.0e-117 425.6 333 64.0
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 4.0e-117 425.6 332 63.3
HPP92_008864 Vanilla planifolia HOM05D003094 ORTHO05D003482 4.0e-117 425.6 332 64.5
AT4G21460 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 9.0e-117 424.5 333 63.1
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 2.0e-116 423.3 332 63.0
Oeu052057.1 Olea europaea HOM05D003094 ORTHO05D003482 1.3e-115 420.6 337 62.3
COL.COLO4_27184 Corchorus olitorius HOM05D003094 ORTHO05D003482 1.7e-115 420.2 342 62.0
Prupe.5G224900 Prunus persica HOM05D003094 ORTHO05D003482 2.2e-115 419.9 337 62.9
Lj4g0013095 Lotus japonicus HOM05D003094 ORTHO05D003482 2.9e-115 419.5 337 62.0
CDE11G0955 Ceratophyllum demersum HOM05D003094 ORTHO05D003482 1.1e-114 417.5 338 59.2
HanXRQChr14g0446571 Helianthus annuus HOM05D003094 ORTHO05D003482 9.3e-114 414.5 335 60.0
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 9.3e-114 414.5 339 61.7
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 1.7e-112 410.2 340 62.1
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 1.7e-112 410.2 339 62.2
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 3.9e-112 409.1 339 61.7
SalBow7G3604 Salvia bowleyana HOM05D003094 ORTHO05D003482 3.9e-112 409.1 333 61.6
Lsat_1_v5_gn_2_64400 Lactuca sativa HOM05D003094 ORTHO05D003482 8.7e-112 407.9 337 58.8
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 1.9e-111 406.8 340 61.5
MSTRG.4516 Avicennia marina HOM05D003094 ORTHO05D003482 1.1e-109 401.0 334 60.8
ECA238G4750 Erigeron canadensis HOM05D003094 ORTHO05D003482 2.4e-109 399.8 335 58.5
Lalb_Chr08g0242311 Lupinus albus HOM05D003094 ORTHO05D003482 5.3e-109 398.7 337 59.1
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 7.6e-108 394.8 337 61.1
TPR.G5116 Trifolium pratense HOM05D003094 ORTHO05D003482 1.1e-106 391.0 337 59.6
Sabra15G0041200 Salix brachista HOM05D003094 ORTHO05D003482 7.9e-105 384.8 423 49.9
Nitab4.5_0004028g0060 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.3e-104 384.0 370 54.1
unitig_21.g20424 Utricularia gibba HOM05D003094 ORTHO05D003482 1.0e-99 367.9 331 57.1
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 1.9e-98 363.6 319 58.6
BcaC05g28647 Brassica carinata HOM05D003094 ORTHO05D003482 5.3e-93 345.5 245 68.6
Nitab4.5_0008678g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.1e-90 337.8 395 48.9
SEGI_02552 Sequoiadendron giganteum HOM05D003094 ORTHO05D003482 1.6e-73 280.8 346 45.4
Nitab4.5_0008639g0020 Nicotiana tabacum HOM05D003094 ORTHO05D003482 8.8e-64 248.4 217 58.5
Prupe.4G184600 Prunus persica HOM05D003094 ORTHO05D003482 6.1e-57 225.7 159 67.3
RcHm_v2.0_Chr2g0128191 Rosa chinensis HOM05D003094 ORTHO05D003482 2.4e-53 213.8 132 77.3
TAR622G0867 Trochodendron aralioides HOM05D003094 ORTHO05D009164 2.1e-49 200.7 234 49.6
RcHm_v2.0_Chr2g0128201 Rosa chinensis HOM05D003094 ORTHO05D003482 1.3e-46 191.4 161 57.8
Oeu010083.1 Olea europaea HOM05D003094 ORTHO05D003482 1.8e-40 171.0 271 39.1
Oeu010081.1 Olea europaea HOM05D003094 ORTHO05D003482 7.5e-39 165.6 140 60.0
SHI53281 Sapria himalayana HOM05D003094 ORTHO05D003482 4.1e-37 159.8 138 55.8
Pp3c18_10090 Physcomitrium patens HOM05D003094 ORTHO05D003482 2.0e-31 141.0 113 61.1
Mapoly0002s0206 Marchantia polymorpha HOM05D003094 ORTHO05D003482 5.0e-27 126.3 104 57.7
CBR_g23797 Chara braunii HOM05D003094 ORTHO05D003482 2.8e-25 120.6 153 45.1
Gohir.A06G136104 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.7e-22 110.2 102 58.8
SMO367G0461 Selaginella moellendorffii HOM05D003094 ORTHO05D003482 7.8e-20 102.4 101 52.5
Nn3g17957 Nelumbo nucifera HOM05D003094 ORTHO05D003482 8.6e-19 99.0 76 64.5
Gohir.D10G144200 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.8e-17 94.0 78 56.4
Gorai.011G161100 Gossypium raimondii HOM05D003094 ORTHO05D003482 3.6e-17 93.6 78 56.4
BcaC05g28648 Brassica carinata HOM05D003094 ORTHO05D003482 1.4e-16 91.7 84 52.4
Gorai.002G151500 Gossypium raimondii HOM05D003094 ORTHO05D003482 4.9e-14 83.2 138 38.4
Oeu029034.1 Olea europaea HOM05D003094 ORTHO05D003482 1.1e-13 82.0 85 49.4
Gorai.003G056600 Gossypium raimondii HOM05D003094 ORTHO05D003482 5.4e-13 79.7 77 54.5
Gohir.D08G096900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.1e-12 77.8 77 54.5
Gorai.001G159100 Gossypium raimondii HOM05D003094 ORTHO05D003482 6.0e-12 76.3 73 53.4
Gorai.012G098500 Gossypium raimondii HOM05D000575 ORTHO05D003482 6.0e-12 76.3 72 55.6
Gohir.A02G112001 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.0e-11 75.5 72 55.6
Gohir.D09G047900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.7e-11 74.7 83 51.8
Gohir.D10G153150 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.7e-11 74.7 72 54.2
Dinv07353 Davidia involucrata HOM05D003094 ORTHO05D003482 6.6e-11 72.8 66 56.1
Dinv09627 Davidia involucrata HOM05D003094 ORTHO05D003482 6.6e-11 72.8 66 56.1
Gohir.D05G318800 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.9e-10 71.2 73 52.1
Gohir.D07G182700 Gossypium hirsutum HOM05D003094 ORTHO05D003482 5.6e-10 69.7 73 49.3
vmacro16434 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 7.3e-10 69.3 70 48.6
Dinv17506 Davidia involucrata HOM05D003094 ORTHO05D003482 1.6e-09 68.2 66 53.0
MCO03G327 Micromonas commoda HOM05D003094 ORTHO05D003482 1.4e-08 65.1 160 30.0
Actinidia35101 Actinidia chinensis HOM05D003094 ORTHO05D003482 1.8e-08 64.7 64 50.0
Gohir.D07G064100 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.4e-08 64.3 77 45.5
Gohir.A07G059300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 5.2e-08 63.2 77 44.2
Gorai.001G067600 Gossypium raimondii HOM05D003094 ORTHO05D003482 5.2e-08 63.2 77 44.2
CiPaw.16G089200 Carya illinoinensis HOM05D003094 ORTHO05D003482 1.2e-07 62.0 115 36.5
Atru.chr9.906 Acer truncatum HOM05D003094 ORTHO05D003482 1.5e-07 61.6 66 50.0
Sc10g0009380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 1.5e-07 61.6 80 50.0
EL10Ac5g11481 Beta vulgaris HOM05D003094 ORTHO05D003482 2.0e-07 61.2 81 46.9
QL10p026559 Quercus lobata HOM05D003094 ORTHO05D003482 2.0e-07 61.2 109 36.7
Rhsim12G0141600 Rhododendron simsii HOM05D003094 ORTHO05D003482 2.0e-07 61.2 63 50.8
Duzib084G0458 Durio zibethinus HOM05D003094 ORTHO05D003482 5.8e-07 59.7 77 40.3
Sed0019035 Sechium edule HOM05D003094 ORTHO05D003482 5.8e-07 59.7 81 39.5
BcaC08g46948 Brassica carinata HOM05D003094 ORTHO05D003482 9.9e-07 58.9 71 42.3
TPR.G35824 Trifolium pratense HOM05D003094 ORTHO05D003482 1.3e-06 58.5 96 36.5
FAN08G1507 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.7e-06 58.2 96 35.4
THA.LOC104812151 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 2.2e-06 57.8 87 39.1
FvH4_5g16690 Fragaria vesca HOM05D003094 ORTHO05D003482 2.9e-06 57.4 97 35.1
MD06G1220600 Malus domestica HOM05D003094 ORTHO05D003482 3.8e-06 57.0 79 45.6
Prupe.5G225000 Prunus persica HOM05D003094 ORTHO05D003482 4.9e-06 56.6 79 43.0
ClCG04G010900 Citrullus lanatus HOM05D003094 ORTHO05D003482 6.4e-06 56.2 82 36.6
FAN18G0043 Fragaria x ananassa HOM05D003094 ORTHO05D003482 6.4e-06 56.2 97 35.1
Manes.01G015200 Manihot esculenta HOM05D003094 ORTHO05D003482 6.4e-06 56.2 69 44.9
TWI81G0976 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 6.4e-06 56.2 89 38.2
RcHm_v2.0_Chr7g0179411 Rosa chinensis HOM05D003094 ORTHO05D003482 8.4e-06 55.8 97 35.1


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