Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 3.0e-137 491.9 260 100.0
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 1.1e-107 393.7 257 82.1
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 2.8e-82 309.3 191 76.4
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.7e-79 300.1 192 74.0
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 2.9e-79 299.3 191 71.2
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 6.5e-79 298.1 194 73.2
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 1.4e-78 297.0 218 66.5
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.5e-78 296.2 191 71.7
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 3.2e-78 295.8 194 71.6
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 1.2e-77 293.9 195 72.3
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.1e-77 293.1 191 71.2
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.7e-77 292.7 191 70.7
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 3.5e-77 292.4 217 64.1
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 4.6e-77 292.0 225 66.2
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 6.0e-77 291.6 194 71.1
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 1.0e-76 290.8 191 71.7
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 1.0e-76 290.8 191 70.7
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.3e-76 290.4 192 71.4
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 1.3e-76 290.4 192 71.4
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 1.3e-76 290.4 191 73.8
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 1.8e-76 290.0 191 70.7
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.3e-76 289.7 194 70.6
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 3.0e-76 289.3 192 69.8
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 3.0e-76 289.3 191 71.7
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 3.9e-76 288.9 194 70.6
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 5.1e-76 288.5 192 70.3
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 5.1e-76 288.5 194 70.6
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 6.7e-76 288.1 191 71.2
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 6.7e-76 288.1 191 71.2
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 6.7e-76 288.1 191 70.7
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 8.7e-76 287.7 185 73.5
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.5e-75 287.0 191 70.2
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.5e-75 287.0 187 73.3
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.9e-75 286.6 193 70.5
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.5e-75 286.2 192 69.3
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 2.5e-75 286.2 191 70.7
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 4.3e-75 285.4 191 70.2
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 4.3e-75 285.4 191 70.7
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 5.7e-75 285.0 193 70.5
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 9.7e-75 284.3 192 69.8
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.3e-74 283.9 253 57.3
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.3e-74 283.9 191 70.2
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.3e-74 283.9 185 72.4
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.6e-74 283.5 189 69.3
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 2.1e-74 283.1 191 69.6
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 2.1e-74 283.1 191 69.1
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.8e-74 282.7 192 69.8
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 2.8e-74 282.7 192 68.8
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 3.7e-74 282.3 191 69.6
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 4.8e-74 282.0 191 69.6
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 8.2e-74 281.2 195 67.2
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 8.2e-74 281.2 191 70.7
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 8.2e-74 281.2 192 68.2
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 1.1e-73 280.8 191 69.1
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 1.1e-73 280.8 191 68.6
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 1.1e-73 280.8 191 70.7
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 1.4e-73 280.4 233 59.7
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.8e-73 280.0 191 70.2
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 2.4e-73 279.6 215 62.8
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 2.4e-73 279.6 225 63.1
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 5.3e-73 278.5 213 65.3
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 9.0e-73 277.7 237 58.6
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 1.2e-72 277.3 192 66.7
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.2e-72 277.3 191 67.0
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 1.5e-72 276.9 191 69.1
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.4e-72 275.8 217 65.0
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 5.9e-72 275.0 217 65.0
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 5.9e-72 275.0 191 69.1
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 7.6e-72 274.6 191 67.5
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.0e-71 274.2 220 64.1
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 1.3e-71 273.9 192 68.2
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.3e-71 273.9 191 68.6
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 1.7e-71 273.5 193 67.4
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 3.8e-71 272.3 191 67.0
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 1.9e-70 270.0 191 67.0
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 1.9e-70 270.0 191 67.0
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 4.2e-70 268.9 193 64.8
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 9.3e-70 267.7 191 66.5
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 2.1e-69 266.5 191 66.0
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 3.6e-69 265.8 191 66.0
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 4.6e-69 265.4 191 64.4
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 7.9e-69 264.6 194 66.0
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 7.9e-69 264.6 166 74.7
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 3.0e-68 262.7 191 65.4
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 2.5e-67 259.6 194 61.9
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 2.5e-67 259.6 194 61.9
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 5.7e-67 258.5 192 62.0
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.8e-66 256.1 192 67.2
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 8.2e-66 254.6 191 64.9
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 2.4e-65 253.1 243 56.0
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 9.1e-65 251.1 194 58.8
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.7e-58 229.2 148 73.6
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 4.7e-53 212.2 151 70.9
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.5e-51 207.2 126 77.8
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 3.2e-46 189.5 130 71.5
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 3.2e-46 189.5 178 52.2
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 3.6e-45 186.0 127 70.1
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 4.7e-45 185.7 142 59.2
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 1.4e-41 174.1 203 46.3
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.1e-41 172.6 149 58.4
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 4.5e-40 169.1 215 43.3
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.1e-38 164.5 121 68.6
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.7e-37 159.8 215 42.3
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 2.8e-34 149.8 195 43.6
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 3.7e-34 149.4 196 40.3
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.5e-32 142.9 223 39.9
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.3e-31 140.2 134 52.2
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.3e-31 140.2 97 68.0
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 3.8e-31 139.4 94 71.3
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.8e-29 133.3 108 61.1
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 1.4e-28 131.0 92 63.0
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 6.8e-28 128.6 117 64.1
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 2.8e-26 123.2 95 65.3
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 1.1e-22 111.3 126 50.8
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 8.6e-15 85.1 63 55.6
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.4e-12 77.8 103 42.7
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.8e-12 77.4 63 61.9
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 6.8e-12 75.5 49 71.4
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 8.9e-12 75.1 86 51.2
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 4.1e-09 66.2 48 58.3
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 2.1e-08 63.9 43 74.4


User provided reference genes

Program Settings