Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.4e-148 529.6 269 100.0
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 3.9e-71 272.3 236 63.1
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 3.7e-53 212.6 252 46.8
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 6.3e-53 211.8 253 47.4
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 8.2e-53 211.5 251 49.0
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 3.1e-52 209.5 243 47.3
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 3.1e-52 209.5 245 49.0
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 3.1e-52 209.5 249 49.8
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 2.0e-51 206.8 250 46.0
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 3.5e-51 206.1 245 48.6
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 4.5e-51 205.7 243 49.4
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 1.7e-50 203.8 246 49.6
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 2.2e-50 203.4 272 45.6
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 2.9e-50 203.0 260 46.9
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 6.5e-50 201.8 245 47.3
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 3.2e-49 199.5 245 48.2
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 7.2e-49 198.4 249 45.4
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 1.2e-48 197.6 258 45.3
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.1e-48 196.8 258 45.3
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 8.0e-48 194.9 243 46.9
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 2.3e-47 193.4 245 44.9
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 2.0e-46 190.3 244 45.5
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 4.4e-46 189.1 244 46.3
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 5.7e-46 188.7 245 44.5
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 5.7e-46 188.7 243 44.0
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 5.7e-46 188.7 245 45.7
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 9.7e-46 188.0 249 44.2
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.7e-45 187.2 255 44.3
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 1.7e-45 187.2 280 43.9
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 6.3e-45 185.3 249 45.0
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 1.2e-43 181.0 216 48.6
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 3.5e-43 179.5 243 42.4
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 1.3e-42 177.6 240 44.2
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 1.3e-42 177.6 240 44.2
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 5.0e-42 175.6 243 43.6
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 2.5e-41 173.3 253 38.7
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 2.5e-41 173.3 253 45.5
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 3.2e-41 172.9 232 43.1
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 7.2e-41 171.8 234 42.3
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 2.7e-40 169.9 234 41.9
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 1.8e-39 167.2 259 40.5
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 9.8e-38 161.4 247 40.5
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 8.3e-37 158.3 234 44.0
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 3.1e-36 156.4 249 42.2
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 9.5e-33 144.8 245 40.0
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 3.7e-29 132.9 261 33.7
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.1e-28 131.3 187 39.6
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 4.1e-28 129.4 257 37.0
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 7.0e-28 128.6 148 50.7
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 1.6e-27 127.5 184 43.5
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 1.6e-24 117.5 180 40.0
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 6.8e-23 112.1 221 34.4
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 3.4e-22 109.8 185 39.5
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 4.6e-19 99.4 176 38.6
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 4.6e-19 99.4 176 38.6
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 1.7e-18 97.4 235 33.2
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 3.0e-18 96.7 80 56.2
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 3.0e-18 96.7 177 38.4
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 6.6e-18 95.5 177 35.0
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 3.6e-16 89.7 74 58.1
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 1.8e-15 87.4 53 69.8
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 1.4e-12 77.8 161 37.3
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 3.6e-08 63.2 39 64.1


User provided reference genes

Program Settings