Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0411300 Oryza sativa ssp. japonica HOM05D004657 ORTHO05D005562 7.8e-195 684.1 483 100.0
Zm00001eb001010 Zea mays HOM05D004657 ORTHO05D005562 6.1e-123 445.3 318 79.9
Zm00001eb119110 Zea mays HOM05D004657 ORTHO05D005562 8.3e-88 328.6 229 80.3
Zm00001eb168110 Zea mays HOM05D004657 ORTHO05D005562 3.0e-69 266.9 228 69.3
Zm00001eb272140 Zea mays HOM05D004657 ORTHO05D005562 1.4e-66 258.1 176 80.1
HPP92_016347 Vanilla planifolia HOM05D004657 ORTHO05D008789 8.4e-56 222.2 249 51.8
MBI02_g08733_MAGBIO Magnolia biondii HOM05D004657 ORTHO05D005562 1.3e-51 208.4 255 47.8
Zm00001eb295260 Zea mays HOM05D004657 ORTHO05D005562 1.1e-50 205.3 277 54.2
Cc00_g16220 Coffea canephora HOM05D004657 ORTHO05D005562 2.4e-50 204.1 237 47.3
TAR381G0611 Trochodendron aralioides HOM05D004657 ORTHO05D005562 4.0e-50 203.4 249 47.8
Eucgr.I00428 Eucalyptus grandis HOM05D004657 ORTHO05D005562 9.0e-50 202.2 246 48.0
TAR625G0843 Trochodendron aralioides HOM05D004657 ORTHO05D005562 9.0e-50 202.2 249 46.2
Hma1.2p1_0047F.1_g027890 Hydrangea macrophylla HOM05D004657 ORTHO05D005562 1.5e-49 201.4 249 47.8
Thecc.01G102700 Theobroma cacao HOM05D004657 ORTHO05D005562 4.4e-49 199.9 249 46.6
PGR004G1209 Punica granatum HOM05D004657 ORTHO05D005562 5.8e-49 199.5 246 47.2
Zm00001eb342160 Zea mays HOM05D004657 ORTHO05D005562 5.8e-49 199.5 202 65.3
MELO3C007762.2 Cucumis melo HOM05D004657 ORTHO05D005562 9.9e-49 198.7 238 47.1
CANSAT01G2418 Cannabis sativa HOM05D004657 ORTHO05D005562 1.7e-48 198.0 249 47.0
MD15G1325300 Malus domestica HOM05D004657 ORTHO05D005562 1.7e-48 198.0 241 46.5
Cpa.g.sc621.1 Carica papaya HOM05D004657 ORTHO05D005562 3.8e-48 196.8 246 45.9
ClCG01G018830 Citrullus lanatus HOM05D004657 ORTHO05D005562 3.8e-48 196.8 246 47.2
Manes.12G135900 Manihot esculenta HOM05D004657 ORTHO05D005562 3.8e-48 196.8 249 44.6
Potri.007G091900 Populus trichocarpa HOM05D004657 ORTHO05D005562 4.9e-48 196.4 246 44.3
Prupe.6G184700 Prunus persica HOM05D004657 ORTHO05D005562 4.9e-48 196.4 249 45.4
DCAR_014230 Daucus carota HOM05D004657 ORTHO05D005562 8.4e-48 195.7 246 46.7
Ciclev10027598m.g Citrus clementina HOM05D004657 ORTHO05D005562 1.4e-47 194.9 246 45.1
Migut.L00115 Erythranthe guttata HOM05D004657 ORTHO05D005562 2.4e-47 194.1 246 45.5
Hma1.2p1_0308F.1_g120150 Hydrangea macrophylla HOM05D004657 ORTHO05D005562 5.4e-47 193.0 259 44.0
Sed0024330 Sechium edule HOM05D004657 ORTHO05D005562 5.4e-47 193.0 249 45.4
Sc16g0005630 Simmondsia chinensis HOM05D004657 ORTHO05D005562 5.4e-47 193.0 249 46.2
Duzib264G0234 Durio zibethinus HOM05D004657 ORTHO05D005562 7.1e-47 192.6 249 45.8
FAN19G1231 Fragaria x ananassa HOM05D004657 ORTHO05D005562 1.2e-46 191.8 251 44.6
FAN28G0529 Fragaria x ananassa HOM05D004657 ORTHO05D005562 1.2e-46 191.8 245 44.9
CsaV3_6G045490 Cucumis sativus L. HOM05D004657 ORTHO05D005562 1.6e-46 191.4 238 45.4
Potri.005G076500 Populus trichocarpa HOM05D004657 ORTHO05D005562 1.6e-46 191.4 246 44.3
FAN23G0181 Fragaria x ananassa HOM05D004657 ORTHO05D005562 2.1e-46 191.0 245 44.9
Sabra05G0063000 Salix brachista HOM05D004657 ORTHO05D005562 2.1e-46 191.0 246 43.9
Sabra07G0075500 Salix brachista HOM05D004657 ORTHO05D005562 2.1e-46 191.0 246 43.9
Gohir.D11G222100 Gossypium hirsutum HOM05D004657 ORTHO05D005562 2.7e-46 190.7 237 44.3
Rhsim10G0161200 Rhododendron simsii HOM05D004657 ORTHO05D005562 3.5e-46 190.3 252 45.2
Manes.13G075300 Manihot esculenta HOM05D004657 ORTHO05D005562 6.0e-46 189.5 238 42.9
PSO781G0272 Papaver somniferum HOM05D004657 ORTHO05D005562 6.0e-46 189.5 246 45.5
RcHm_v2.0_Chr2g0114541 Rosa chinensis HOM05D004657 ORTHO05D005562 6.0e-46 189.5 249 43.8
THA.LOC104807698 Tarenaya hassleriana HOM05D004657 ORTHO05D005562 6.0e-46 189.5 241 44.0
Gorai.007G239400 Gossypium raimondii HOM05D004657 ORTHO05D005562 7.8e-46 189.1 237 43.5
Lsat_1_v5_gn_4_142741 Lactuca sativa HOM05D004657 ORTHO05D005562 7.8e-46 189.1 246 44.7
COL.COLO4_09954 Corchorus olitorius HOM05D004657 ORTHO05D005562 1.0e-45 188.7 249 44.6
QL06p049779 Quercus lobata HOM05D004657 ORTHO05D005562 1.0e-45 188.7 248 45.6
Zm00001eb210920 Zea mays HOM05D004657 ORTHO05D005562 1.0e-45 188.7 186 63.4
CSS0006663 Camellia sinensis var. sinensis HOM05D004657 ORTHO05D005562 1.7e-45 188.0 246 44.7
DCAR_011511 Daucus carota HOM05D004657 ORTHO05D005562 1.7e-45 188.0 238 45.8
Duzib147G0720 Durio zibethinus HOM05D004657 ORTHO05D005562 1.7e-45 188.0 249 43.8
Gohir.A11G200900 Gossypium hirsutum HOM05D004657 ORTHO05D005562 1.7e-45 188.0 237 43.9
PSO541G4803 Papaver somniferum HOM05D004657 ORTHO05D005562 1.7e-45 188.0 246 45.5
Aqoxy6G00812 Aquilegia oxysepala HOM05D004657 ORTHO05D005562 2.3e-45 187.6 252 43.3
FAN26G2002 Fragaria x ananassa HOM05D004657 ORTHO05D005562 2.3e-45 187.6 245 44.1
arahy.Tifrunner.gnm1.ann1.Q2VPH2 Arachis hypogaea HOM05D004657 ORTHO05D005562 3.0e-45 187.2 243 42.0
THA.LOC104824872 Tarenaya hassleriana HOM05D004657 ORTHO05D005562 3.0e-45 187.2 243 42.8
CiPaw.04G098700 Carya illinoinensis HOM05D004657 ORTHO05D005562 3.9e-45 186.8 249 44.6
Glyma.11G239700 Glycine max HOM05D004657 ORTHO05D005562 3.9e-45 186.8 249 44.2
Glyma.18G017700 Glycine max HOM05D004657 ORTHO05D005562 5.1e-45 186.4 249 44.2
Gohir.A02G143600 Gossypium hirsutum HOM05D004657 ORTHO05D005562 5.1e-45 186.4 245 44.9
Zm00001eb008600 Zea mays HOM05D004657 ORTHO05D005562 6.6e-45 186.0 315 47.9
arahy.Tifrunner.gnm1.ann1.4BU7T8 Arachis hypogaea HOM05D004657 ORTHO05D005562 8.7e-45 185.7 243 41.6
Thhalv10026765m.g Eutrema salsugineum HOM05D004657 ORTHO05D005562 8.7e-45 185.7 241 44.0
Gohir.D03G036900 Gossypium hirsutum HOM05D004657 ORTHO05D005562 8.7e-45 185.7 245 44.5
Gorai.003G038700 Gossypium raimondii HOM05D004657 ORTHO05D005562 8.7e-45 185.7 245 44.5
Lj6g0008145 Lotus japonicus HOM05D004657 ORTHO05D005562 1.1e-44 185.3 245 44.1
Phvul.001G251700 Phaseolus vulgaris HOM05D004657 ORTHO05D005562 1.1e-44 185.3 246 44.7
Peaxi162Scf00805g00021 Petunia axillaris HOM05D004657 ORTHO05D005562 1.5e-44 184.9 246 43.9
Sp7g36050 Schrenkiella parvula HOM05D004657 ORTHO05D005562 2.5e-44 184.1 241 43.6
AT4G39840 Arabidopsis thaliana HOM05D004657 ORTHO05D005562 3.3e-44 183.7 241 43.2
MSTRG.3785 Avicennia marina HOM05D004657 ORTHO05D005562 5.6e-44 183.0 392 35.5
HanXRQChr17g0543271 Helianthus annuus HOM05D004657 ORTHO05D005562 5.6e-44 183.0 249 45.0
Lj2P550T25 Lonicera japonica HOM05D004657 ORTHO05D005562 5.6e-44 183.0 246 43.5
AL7G12070 Arabidopsis lyrata HOM05D004657 ORTHO05D005562 7.3e-44 182.6 241 42.7
Nitab4.5_0000897g0030 Nicotiana tabacum HOM05D004657 ORTHO05D005562 7.3e-44 182.6 234 43.6
VMungo1383G1250 Vigna mungo HOM05D004657 ORTHO05D005562 7.3e-44 182.6 249 43.0
Aa31LG6G15430 Aethionema arabicum HOM05D004657 ORTHO05D005562 9.6e-44 182.2 241 42.7
Carub.0007s0176 Capsella rubella HOM05D004657 ORTHO05D005562 1.3e-43 181.8 241 42.7
Medtr3g087360 Medicago truncatula HOM05D004657 ORTHO05D005562 1.6e-43 181.4 245 42.4
MSTRG.23340 Avicennia marina HOM05D004657 ORTHO05D005562 2.1e-43 181.0 245 43.7
BcaNung00905 Brassica carinata HOM05D004657 ORTHO05D005562 2.1e-43 181.0 249 42.6
A01p00750 Brassica napus HOM05D004657 ORTHO05D005562 2.1e-43 181.0 249 42.6
C01p00860 Brassica napus HOM05D004657 ORTHO05D005562 2.1e-43 181.0 249 42.6
BolC1t00087H Brassica oleracea HOM05D004657 ORTHO05D005562 2.1e-43 181.0 249 42.6
BraA01t00078Z Brassica rapa HOM05D004657 ORTHO05D005562 2.1e-43 181.0 249 42.6
unitig_748.g8654 Utricularia gibba HOM05D004657 ORTHO05D005562 2.1e-43 181.0 300 38.7
MSTRG.2565 Avicennia marina HOM05D004657 ORTHO05D005562 4.8e-43 179.9 240 42.1
CARHR246860 Cardamine hirsuta HOM05D004657 ORTHO05D005562 4.8e-43 179.9 241 42.3
TWI77G0153 Tripterygium wilfordii HOM05D004657 ORTHO05D005562 6.2e-43 179.5 239 42.3
Phvul.002G255300 Phaseolus vulgaris HOM05D004657 ORTHO05D005562 8.1e-43 179.1 241 42.3
PGSC0003DMG400001895 Solanum tuberosum HOM05D004657 ORTHO05D005562 8.1e-43 179.1 238 42.0
Cfa002676 Carpinus fangiana HOM05D004657 ORTHO05D005562 1.1e-42 178.7 249 43.0
Nitab4.5_0000004g0340 Nicotiana tabacum HOM05D004657 ORTHO05D005562 1.1e-42 178.7 234 44.0
CAN.G480.1 Capsicum annuum HOM05D004657 ORTHO05D005562 1.4e-42 178.3 254 41.7
CiPaw.03G141100 Carya illinoinensis HOM05D004657 ORTHO05D005562 1.8e-42 177.9 272 38.6
Haze_24945 Corylus avellana HOM05D004657 ORTHO05D005562 1.8e-42 177.9 249 43.4
Solyc03g078640.1 Solanum lycopersicum HOM05D004657 ORTHO05D005562 1.8e-42 177.9 246 42.3
PGSC0003DMG400023187 Solanum tuberosum HOM05D004657 ORTHO05D005562 2.4e-42 177.6 246 42.3
Lsat_1_v5_gn_5_43821 Lactuca sativa HOM05D004657 ORTHO05D005562 3.1e-42 177.2 237 42.6
TWI53G1309 Tripterygium wilfordii HOM05D004657 ORTHO05D005562 3.1e-42 177.2 249 41.8
Glyma.08G136600 Glycine max HOM05D004657 ORTHO05D005562 6.9e-42 176.0 246 41.9
Sopen03g021540 Solanum pennellii HOM05D004657 ORTHO05D005562 6.9e-42 176.0 246 41.9
SGA_v2.0_scaffold34G13594 Striga asiatica HOM05D004657 ORTHO05D005562 6.9e-42 176.0 217 45.2
unitig_32.g11813 Utricularia gibba HOM05D004657 ORTHO05D005562 9.0e-42 175.6 238 42.9
BolC3t20095H Brassica oleracea HOM05D004657 ORTHO05D005562 1.2e-41 175.3 261 41.4
BcaNung05325 Brassica carinata HOM05D004657 ORTHO05D005562 1.5e-41 174.9 261 41.0
Psat5g089640 Pisum sativum HOM05D004657 ORTHO05D005562 1.5e-41 174.9 245 42.0
C03p78370 Brassica napus HOM05D004657 ORTHO05D005562 2.0e-41 174.5 261 41.0
A08p23310 Brassica napus HOM05D004657 ORTHO05D005562 2.6e-41 174.1 242 42.1
BraA08t34286Z Brassica rapa HOM05D004657 ORTHO05D005562 2.6e-41 174.1 242 42.1
Solyc04g055090.1 Solanum lycopersicum HOM05D004657 ORTHO05D005562 2.6e-41 174.1 238 41.2
Sopen04g024940 Solanum pennellii HOM05D004657 ORTHO05D005562 3.4e-41 173.7 238 40.8
VMungo0251G2127 Vigna mungo HOM05D004657 ORTHO05D005562 3.4e-41 173.7 240 41.7
Atru.chr4.84 Acer truncatum HOM05D004657 ORTHO05D005562 1.7e-40 171.4 246 41.9
Lalb_Chr07g0185151 Lupinus albus HOM05D004657 ORTHO05D005562 1.7e-40 171.4 246 39.4
SGA_v2.0_scaffold47G17783 Striga asiatica HOM05D004657 ORTHO05D005562 2.9e-40 170.6 247 38.9
Zm00001eb024090 Zea mays HOM05D004657 ORTHO05D005562 4.9e-40 169.9 110 80.9
Lj4g0007261 Lotus japonicus HOM05D004657 ORTHO05D005562 8.4e-40 169.1 252 41.3
unitig_88.g27724 Utricularia gibba HOM05D004657 ORTHO05D005562 8.4e-40 169.1 231 40.7
Psat7g054320 Pisum sativum HOM05D004657 ORTHO05D005562 1.4e-39 168.3 242 41.7
Medtr8g090265 Medicago truncatula HOM05D004657 ORTHO05D005562 1.2e-38 165.2 243 39.1
Zm00001eb030060 Zea mays HOM05D004657 ORTHO05D005562 1.2e-38 165.2 108 79.6
TPR.G6250 Trifolium pratense HOM05D004657 ORTHO05D005562 1.6e-38 164.9 243 39.5
ATR0564G070 Amborella trichopoda HOM05D004657 ORTHO05D005562 4.6e-38 163.3 232 43.5
DCAR_001485 Daucus carota HOM05D004657 ORTHO05D005562 7.9e-38 162.5 247 40.5
SalBow3G2946 Salvia bowleyana HOM05D004657 ORTHO05D005562 1.8e-37 161.4 217 43.8
SHI11535 Sapria himalayana HOM05D004657 ORTHO05D000023 1.9e-36 157.9 261 35.2
Glyma.05G179100 Glycine max HOM05D004657 ORTHO05D005562 9.6e-36 155.6 239 38.9
Zm00001eb342170 Zea mays HOM05D004657 ORTHO05D005562 3.1e-34 150.6 108 75.0
SEGI_28024 Sequoiadendron giganteum HOM05D004657 ORTHO05D005562 4.9e-32 143.3 254 35.4
Lj4g0017498 Lotus japonicus HOM05D004657 ORTHO05D005562 1.9e-31 141.4 231 38.5
Mapoly0036s0106 Marchantia polymorpha HOM05D004657 ORTHO05D005562 9.6e-28 129.0 281 35.9
Zm00001eb310250 Zea mays HOM05D004657 ORTHO05D005562 4.8e-27 126.7 146 60.3
Zm00001eb332080 Zea mays HOM05D004657 ORTHO05D005562 3.4e-25 120.6 93 77.4
SMO012G0039 Selaginella moellendorffii HOM05D004657 ORTHO05D005562 7.6e-25 119.4 248 37.1
Pp3c24_14210 Physcomitrium patens HOM05D004657 ORTHO05D005562 4.2e-23 113.6 222 35.1
Pp3c8_17900 Physcomitrium patens HOM05D004657 ORTHO05D005562 2.1e-22 111.3 232 32.8
AagrBONN_evm.TU.Sc2ySwM_368.2671 Anthoceros agrestis HOM05D004657 ORTHO05D005562 2.3e-21 107.8 253 32.4
Zm00001eb332070 Zea mays HOM05D004657 ORTHO05D005562 1.5e-20 105.1 66 80.3
Zm00001eb272130 Zea mays HOM05D004657 ORTHO05D005562 1.1e-18 99.0 119 57.1
Zm00001eb394500 Zea mays HOM05D002775 ORTHO05D005562 1.1e-18 99.0 140 52.9
Actinidia36592 Actinidia chinensis HOM05D004657 ORTHO05D005562 1.4e-18 98.6 122 44.3
CDE12G0473 Ceratophyllum demersum HOM05D001805 ORTHO05D001734 9.0e-18 95.9 128 43.0
CBR_g57642 Chara braunii HOM05D004657 ORTHO05D005562 1.7e-16 91.7 258 29.1
CBR_g45841 Chara braunii HOM05D004657 ORTHO05D005562 2.2e-16 91.3 235 30.6
Nitab4.5_0000104g0160 Nicotiana tabacum HOM05D004657 ORTHO05D005562 1.4e-15 88.6 246 28.5
Zm00001eb310240 Zea mays HOM05D004657 ORTHO05D005562 1.2e-14 85.5 89 56.2
TPR.G17843 Trifolium pratense HOM05D004657 ORTHO05D005562 2.1e-14 84.7 82 51.2
Zm00001eb410580 Zea mays HOM05D004657 ORTHO05D005562 2.4e-10 71.2 93 52.7
MD01G1028100 Malus domestica HOM05D004657 ORTHO05D005562 3.2e-07 60.8 72 41.7
Oeu054841.2 Olea europaea HOM05D004657 ORTHO05D005562 3.6e-06 57.4 53 47.2
CDE04G1361 Ceratophyllum demersum HOM05D001805 ORTHO05D001734 7.9e-06 56.2 55 47.3


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