Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0246500 Oryza sativa ssp. japonica HOM05D038218 ORTHO05D006653 2.2e-41 171.8 81 100.0
Os10g0397066 Oryza sativa ssp. japonica HOM05D038218 ORTHO05D006653 3.8e-38 161.0 81 93.8
Os04g0485500 Oryza sativa ssp. japonica HOM05D038218 ORTHO05D006653 4.2e-37 157.5 81 92.6
Os11g0704300 Oryza sativa ssp. japonica HOM05D001685 ORTHO05D006653 1.8e-24 115.5 74 81.1
Zm00001eb417820 Zea mays HOM05D001685 ORTHO05D006653 3.6e-20 101.3 78 62.8
Zm00001eb164640 Zea mays HOM05D001685 ORTHO05D006653 2.6e-18 95.1 78 61.5
Cc10_g08830 Coffea canephora HOM05D001685 ORTHO05D006653 1.6e-07 59.3 37 75.7
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 1.6e-07 59.3 37 73.0
PSO384G4450 Papaver somniferum HOM05D001685 ORTHO05D006653 1.6e-07 59.3 38 71.1
PGR083G0190 Punica granatum HOM05D001685 ORTHO05D006653 1.6e-07 59.3 75 46.7
MSTRG.19725 Avicennia marina HOM05D001685 ORTHO05D006653 2.7e-07 58.5 46 65.2
CiPaw.13G094700 Carya illinoinensis HOM05D001685 ORTHO05D006653 3.5e-07 58.2 37 73.0
Haze_24093 Corylus avellana HOM05D001685 ORTHO05D006653 7.8e-07 57.0 69 50.7
HanXRQChr05g0134921 Helianthus annuus HOM05D001685 ORTHO05D006653 7.8e-07 57.0 37 73.0
Oeu052796.1 Olea europaea HOM05D001685 ORTHO05D006653 7.8e-07 57.0 37 73.0
Actinidia07035 Actinidia chinensis HOM05D001685 ORTHO05D006653 1.0e-06 56.6 45 60.0
Aqoxy5G01203 Aquilegia oxysepala HOM05D001685 ORTHO05D006653 1.0e-06 56.6 70 50.0
ECA236G2424 Erigeron canadensis HOM05D001685 ORTHO05D006653 1.0e-06 56.6 37 73.0
Nn2g10368 Nelumbo nucifera HOM05D001685 ORTHO05D006653 1.0e-06 56.6 69 47.8
HPP92_014383 Vanilla planifolia HOM05D001685 ORTHO05D006653 1.3e-06 56.2 45 60.0
Aqoxy4G02919 Aquilegia oxysepala HOM05D001685 ORTHO05D006653 3.0e-06 55.1 38 65.8
SEGI_38445 Sequoiadendron giganteum HOM05D001685 ORTHO05D006653 3.0e-06 55.1 75 41.3
arahy.Tifrunner.gnm1.ann1.B8I18B Arachis hypogaea HOM05D001685 ORTHO05D006653 3.9e-06 54.7 67 43.3
arahy.Tifrunner.gnm1.ann1.ZC6F0H Arachis hypogaea HOM05D001685 ORTHO05D006653 3.9e-06 54.7 67 43.3
Migut.J01517 Erythranthe guttata HOM05D001685 ORTHO05D006653 3.9e-06 54.7 38 68.4
SalBow6G3863 Salvia bowleyana HOM05D001685 ORTHO05D006653 3.9e-06 54.7 48 58.3
Hund18911 Selenicereus undatus HOM05D001685 ORTHO05D006653 3.9e-06 54.7 77 45.5
TAR636G3542 Trochodendron aralioides HOM05D001685 ORTHO05D006653 3.9e-06 54.7 37 70.3
arahy.Tifrunner.gnm1.ann1.KF4YKV Arachis hypogaea HOM05D001685 ORTHO05D006653 6.6e-06 53.9 67 43.3
DCAR_004329 Daucus carota HOM05D001685 ORTHO05D006653 6.6e-06 53.9 37 67.6
DCAR_005335 Daucus carota HOM05D001685 ORTHO05D006653 6.6e-06 53.9 37 67.6
Eucgr.B02369 Eucalyptus grandis HOM05D001685 ORTHO05D006653 6.6e-06 53.9 81 43.2
Peaxi162Scf00066g00069 Petunia axillaris HOM05D001685 ORTHO05D006653 8.6e-06 53.5 32 75.0


User provided reference genes

Program Settings