Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0170500 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 5.2e-50 200.7 97 100.0
Os08g0170100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 7.9e-22 107.1 70 72.9
Os08g0170700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 2.5e-20 102.1 74 62.2
Os11g0130900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.3e-19 99.8 71 66.2
Zm00001eb117700 Zea mays HOM05D000011 ORTHO05D000157 1.0e-16 90.1 71 56.3
Os08g0150150 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 4.9e-16 87.8 71 60.6
Zm00001eb418840 Zea mays HOM05D000011 ORTHO05D000157 4.9e-16 87.8 77 55.8
Os06g0524900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.1e-15 86.7 72 55.6
Zm00001eb089490 Zea mays HOM05D000011 ORTHO05D000157 6.0e-14 80.9 77 51.9
Os10g0124400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.0e-13 78.6 71 53.5
Os11g0590700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D016364 1.1e-12 76.6 71 47.9
Os11g0590400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D016364 2.5e-12 75.5 71 47.9
Os12g0553600 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D016364 7.4e-12 73.9 71 46.5
Os12g0516300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.6e-11 72.8 71 46.5
Os12g0553200 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.6e-11 72.8 71 46.5
Os11g0588600 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 2.2e-11 72.4 71 46.5
Zm00001eb091490 Zea mays HOM05D000011 ORTHO05D000157 3.7e-11 71.6 71 46.5
Zm00001eb091500 Zea mays HOM05D000011 ORTHO05D000157 3.7e-11 71.6 71 46.5
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 3.7e-11 71.6 75 52.0
Os11g0657900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 4.8e-11 71.2 73 43.8
Os12g0552900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 4.8e-11 71.2 71 45.1
Os01g0603100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 8.2e-11 70.5 70 50.0
Zm00001eb405700 Zea mays HOM05D000011 ORTHO05D016364 2.4e-10 68.9 71 45.1
Os11g0588400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D016364 5.3e-10 67.8 70 42.9
Zm00001eb405290 Zea mays HOM05D000011 ORTHO05D016364 5.3e-10 67.8 71 46.5
Os07g0294100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D016364 1.2e-09 66.6 71 39.4
Zm00001eb419270 Zea mays HOM05D000011 ORTHO05D000157 3.4e-09 65.1 79 41.8
Os05g0240200 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 4.5e-09 64.7 43 67.4
Os11g0589800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.0e-08 63.5 65 43.1
Zm00001eb405270 Zea mays HOM05D000011 ORTHO05D016364 1.3e-08 63.2 71 45.1
Zm00001eb271410 Zea mays HOM05D000011 ORTHO05D000157 5.0e-08 61.2 72 43.1
Zm00001eb113900 Zea mays HOM05D000011 ORTHO05D000157 6.5e-08 60.8 72 43.1
Zm00001eb042890 Zea mays HOM05D000011 ORTHO05D000157 1.4e-07 59.7 81 35.8
Os11g0550500 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.2e-07 58.5 71 40.8
Os12g0467300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 4.6e-06 54.7 73 39.7


User provided reference genes

Program Settings