Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0137050 Oryza sativa ssp. japonica HOM05D036043 ORTHO05D000059 5.5e-115 417.5 197 100.0
Os05g0353100 Oryza sativa ssp. japonica HOM05D036043 ORTHO05D000059 2.4e-70 269.2 138 92.0
Os06g0548200 Oryza sativa ssp. japonica HOM05D000128 ORTHO05D000059 1.5e-27 127.1 59 93.2
Os08g0525100 Oryza sativa ssp. japonica HOM05D036043 ORTHO05D000059 2.0e-24 116.7 61 88.5
Zm00001eb277780 Zea mays HOM05D000128 ORTHO05D000059 4.2e-22 109.0 59 76.3
Os06g0548100 Oryza sativa ssp. japonica HOM05D000128 ORTHO05D000059 9.1e-17 91.3 70 58.6
Zm00001eb384940 Zea mays HOM05D000128 ORTHO05D000059 1.0e-15 87.8 70 55.7
Zm00001eb277770 Zea mays HOM05D000128 ORTHO05D000059 3.3e-11 72.8 70 48.6
Zm00001eb384930 Zea mays HOM05D000128 ORTHO05D000059 1.3e-10 70.9 69 43.5
Os06g0549900 Oryza sativa ssp. japonica HOM05D000128 ORTHO05D000059 4.8e-10 68.9 52 57.7
Zm00001eb384900 Zea mays HOM05D000128 ORTHO05D000059 4.1e-09 65.9 60 50.0
Os06g0549300 Oryza sativa ssp. japonica HOM05D000128 ORTHO05D000059 4.5e-08 62.4 65 43.1
Actinidia35356 Actinidia chinensis HOM05D000128 ORTHO05D000059 1.0e-07 61.2 58 46.6
QL08p047107 Quercus lobata HOM05D000128 ORTHO05D000059 1.0e-07 61.2 62 43.5
Zm00001eb277710 Zea mays HOM05D000128 ORTHO05D000059 1.3e-07 60.8 68 42.6
ATR0763G249 Amborella trichopoda HOM05D000128 ORTHO05D000059 3.8e-07 59.3 68 36.8
Os06g0548800 Oryza sativa ssp. japonica HOM05D000128 ORTHO05D000059 3.8e-07 59.3 56 48.2
ATR0763G029 Amborella trichopoda HOM05D000128 ORTHO05D000059 5.0e-07 58.9 65 41.5
Haze_05904 Corylus avellana HOM05D000128 ORTHO05D000059 5.0e-07 58.9 60 41.7
Zm00001eb172390 Zea mays HOM05D000128 ORTHO05D000059 6.5e-07 58.5 65 46.2
Lj2g0017572 Lotus japonicus HOM05D000128 ORTHO05D000059 8.5e-07 58.2 61 37.7
Os06g0549600 Oryza sativa ssp. japonica HOM05D000128 ORTHO05D000059 8.5e-07 58.2 57 47.4
Potri.001G463550 Populus trichocarpa HOM05D000128 ORTHO05D000059 8.5e-07 58.2 52 48.1
QL05p063837 Quercus lobata HOM05D000128 ORTHO05D000059 1.1e-06 57.8 54 46.3
MD05G1268400 Malus domestica HOM05D000128 ORTHO05D000059 1.9e-06 57.0 67 34.3
Lj4g0023722 Lotus japonicus HOM05D000128 ORTHO05D000059 2.5e-06 56.6 57 40.4
MD05G1268500 Malus domestica HOM05D000128 ORTHO05D000059 3.2e-06 56.2 73 34.2
MD10G1244500 Malus domestica HOM05D000128 ORTHO05D000059 3.2e-06 56.2 79 35.4
Thecc.06G014800 Theobroma cacao HOM05D000128 ORTHO05D000059 3.2e-06 56.2 61 42.6
Lj1C1119T7 Lonicera japonica HOM05D000128 ORTHO05D000059 5.5e-06 55.5 113 27.4
Sc17g0004530 Simmondsia chinensis HOM05D000128 ORTHO05D000059 5.5e-06 55.5 65 38.5
arahy.Tifrunner.gnm1.ann1.IK25XK Arachis hypogaea HOM05D000128 ORTHO05D000059 7.2e-06 55.1 68 36.8
Ciclev10018216m.g Citrus clementina HOM05D000128 ORTHO05D000059 7.2e-06 55.1 60 40.0
Lj1C1116T2 Lonicera japonica HOM05D000128 ORTHO05D000059 7.2e-06 55.1 113 27.4
TPR.G30365 Trifolium pratense HOM05D000128 ORTHO05D000059 7.2e-06 55.1 56 44.6
Lj6g0018397 Lotus japonicus HOM05D000128 ORTHO05D000059 9.4e-06 54.7 68 38.2
PSO541G4094 Papaver somniferum HOM05D000128 ORTHO05D000059 9.4e-06 54.7 68 35.3


User provided reference genes

Program Settings