Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os08g0126500 Oryza sativa ssp. japonica HOM05D024425 ORTHO05D026012 2.1e-235 818.5 385 100.0
Zm00001eb424780 Zea mays HOM05D024425 ORTHO05D026012 2.6e-68 263.5 478 36.0
Zm00001eb079930 Zea mays HOM05D024425 ORTHO05D026012 1.0e-64 251.5 482 35.7
Zm00001eb061950 Zea mays HOM05D024425 ORTHO05D026012 9.6e-63 245.0 460 35.7
Zm00001eb031200 Zea mays HOM05D024425 ORTHO05D026012 2.6e-15 87.4 195 35.9
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.8e-14 84.0 409 25.2
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 3.7e-14 83.6 383 23.8
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 7.0e-13 79.3 364 23.4
Lj5C565T5 Lonicera japonica HOM05D000151 ORTHO05D000074 5.9e-12 76.3 358 22.9
TWI23G0143 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.9e-12 76.3 407 23.1
Peaxi162Scf00074g00085 Petunia axillaris HOM05D000151 ORTHO05D000074 1.3e-11 75.1 377 25.2
PGR031G1698 Punica granatum HOM05D000151 ORTHO05D000074 1.3e-11 75.1 378 25.1
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.9e-11 73.9 423 23.2
Lj5C567G10 Lonicera japonica HOM05D000151 ORTHO05D000074 2.9e-11 73.9 343 23.0
Aqoxy7G03016 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.8e-11 73.6 367 21.3
TWI31G0298 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.9e-10 71.2 404 22.5
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 2.5e-10 70.9 391 24.3
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 3.2e-10 70.5 366 26.8
Aqoxy5G01075 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.2e-10 70.1 396 24.7
Aqoxy2G00256 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.5e-10 69.7 371 23.7
Aqoxy4G01250 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.5e-10 69.7 388 21.9
Lsat_1_v5_gn_9_46700 Lactuca sativa HOM05D000151 ORTHO05D000074 5.5e-10 69.7 389 23.4
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 7.2e-10 69.3 382 23.6
Peaxi162Scf00074g00087 Petunia axillaris HOM05D000151 ORTHO05D000074 7.2e-10 69.3 400 24.8
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 9.4e-10 68.9 391 23.8
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-09 68.6 388 23.5
FvH4_4g26320 Fragaria vesca HOM05D000151 ORTHO05D000074 2.1e-09 67.8 204 27.5
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 2.7e-09 67.4 414 24.2
TWI38G0386 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.7e-09 67.4 187 27.8
Rhsim13G0017600 Rhododendron simsii HOM05D007879 ORTHO05D000440 8.0e-09 65.9 199 27.1
Os03g0855500 Oryza sativa ssp. japonica HOM05D022970 ORTHO05D000074 1.8e-08 64.7 377 26.5
Peaxi162Scf00119g00123 Petunia axillaris HOM05D000151 ORTHO05D000074 1.8e-08 64.7 392 23.7
Peaxi162Scf00119g00124 Petunia axillaris HOM05D000151 ORTHO05D000074 1.8e-08 64.7 392 23.7
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.0e-08 63.9 367 25.1
Peaxi162Scf00074g00086 Petunia axillaris HOM05D000151 ORTHO05D000074 5.2e-08 63.2 265 27.9
DCAR_022317 Daucus carota HOM05D000151 ORTHO05D000074 6.8e-08 62.8 385 21.8
TWI38G2055 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.8e-08 62.8 385 23.1
MSTRG.1137 Avicennia marina HOM05D000151 ORTHO05D000074 8.8e-08 62.4 136 35.3
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 8.8e-08 62.4 401 24.7
ClCG05G015310 Citrullus lanatus HOM05D000151 ORTHO05D000074 1.5e-07 61.6 363 25.6
Lsat_1_v5_gn_2_5520 Lactuca sativa HOM05D000151 ORTHO05D000074 1.5e-07 61.6 382 24.6
FAN12G0486 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.6e-07 60.8 223 24.2
Lalb_Chr23g0265911 Lupinus albus HOM05D000151 ORTHO05D000074 3.4e-07 60.5 383 23.5
CiPaw.06G077200 Carya illinoinensis HOM05D000151 ORTHO05D000074 4.4e-07 60.1 207 26.6
ECA247G0474 Erigeron canadensis HOM05D007879 ORTHO05D000440 9.8e-07 58.9 172 27.3
Thecc.08G054100 Theobroma cacao HOM05D000151 ORTHO05D000074 9.8e-07 58.9 134 33.6
Actinidia00702 Actinidia chinensis HOM05D007879 ORTHO05D000440 1.3e-06 58.5 197 26.9
Haze_04806 Corylus avellana HOM05D007879 ORTHO05D000440 2.8e-06 57.4 190 26.8
Lj6g0010361 Lotus japonicus HOM05D007879 ORTHO05D000440 3.7e-06 57.0 176 27.3
RcHm_v2.0_Chr6g0292521 Rosa chinensis HOM05D007879 ORTHO05D000440 3.7e-06 57.0 190 26.3
Cfa006040 Carpinus fangiana HOM05D007879 ORTHO05D000440 8.3e-06 55.8 133 30.1
Lj2P493T39 Lonicera japonica HOM05D000151 ORTHO05D000074 8.3e-06 55.8 297 23.2


User provided reference genes

Program Settings