Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 5.6e-125 451.1 244 100.0
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 5.0e-73 278.5 248 68.5
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 1.8e-54 216.9 291 45.4
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 2.3e-54 216.5 281 48.0
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 9.7e-53 211.1 280 46.1
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 9.7e-53 211.1 257 47.5
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 2.2e-52 209.9 272 45.2
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 3.7e-52 209.1 275 46.5
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 8.2e-52 208.0 283 46.3
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 1.1e-51 207.6 273 44.7
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 3.1e-51 206.1 266 47.0
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 3.1e-51 206.1 255 48.2
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 4.1e-51 205.7 267 47.2
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 4.1e-51 205.7 285 46.7
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.0e-51 204.9 262 46.6
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.0e-51 204.9 262 46.6
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 9.1e-51 204.5 252 48.0
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.6e-50 203.8 255 49.0
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.0e-50 203.4 276 44.9
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 2.7e-50 203.0 280 43.9
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 2.7e-50 203.0 284 44.4
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 2.7e-50 203.0 272 44.5
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 4.5e-50 202.2 257 46.3
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 5.9e-50 201.8 269 45.4
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.9e-50 201.8 269 45.4
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 7.7e-50 201.4 266 45.5
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 7.7e-50 201.4 276 44.6
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.0e-49 201.1 276 43.8
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 1.3e-49 200.7 277 45.1
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.3e-49 200.7 273 44.3
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.3e-49 200.7 272 44.5
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.7e-49 200.3 269 45.0
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.7e-49 200.3 275 44.4
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 1.7e-49 200.3 259 47.5
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 3.8e-49 199.1 291 45.4
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 3.8e-49 199.1 267 44.9
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 6.5e-49 198.4 277 44.0
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.1e-48 197.6 265 44.2
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.1e-48 197.6 278 45.3
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 1.1e-48 197.6 271 45.0
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 1.5e-48 197.2 280 44.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 2.5e-48 196.4 270 44.1
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 2.5e-48 196.4 266 45.9
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 2.5e-48 196.4 279 44.4
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 3.2e-48 196.1 281 44.5
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 5.5e-48 195.3 287 41.8
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 7.2e-48 194.9 275 44.0
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 9.4e-48 194.5 232 49.6
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 9.4e-48 194.5 280 42.9
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.2e-47 194.1 252 44.8
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.2e-47 194.1 290 44.1
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.6e-47 193.7 286 42.3
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.6e-47 193.7 287 44.9
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 1.6e-47 193.7 267 44.6
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 2.1e-47 193.4 287 43.2
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 2.1e-47 193.4 288 44.8
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 2.7e-47 193.0 287 43.2
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 2.7e-47 193.0 124 74.2
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 4.7e-47 192.2 275 44.4
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 4.7e-47 192.2 249 47.0
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 6.1e-47 191.8 116 75.9
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 6.1e-47 191.8 116 75.9
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 8.0e-47 191.4 282 44.7
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 1.0e-46 191.0 308 40.9
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 2.3e-46 189.9 302 41.1
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 5.2e-46 188.7 116 73.3
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 1.5e-45 187.2 272 43.4
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 1.5e-45 187.2 273 44.0
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 2.0e-45 186.8 279 44.1
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 4.4e-45 185.7 116 73.3
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 4.4e-45 185.7 116 73.3
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 4.4e-45 185.7 116 73.3
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 4.4e-45 185.7 264 45.5
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 4.4e-45 185.7 263 44.5
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 5.7e-45 185.3 274 42.7
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 9.8e-45 184.5 112 75.0
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 9.8e-45 184.5 159 59.7
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.7e-44 183.7 297 41.4
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 3.7e-44 182.6 149 61.1
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 1.8e-43 180.3 271 42.1
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 2.4e-43 179.9 283 41.3
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 4.1e-43 179.1 162 59.3
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 5.4e-43 178.7 277 42.2
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 5.4e-43 178.7 286 42.7
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.0e-42 176.8 279 41.9
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 2.7e-42 176.4 274 42.7
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 4.5e-42 175.6 283 41.3
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 7.7e-42 174.9 98 80.6
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.3e-41 173.3 110 73.6
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 8.6e-41 171.4 98 79.6
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 7.2e-40 168.3 102 77.5
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 3.6e-39 166.0 98 76.5
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 3.0e-38 162.9 99 75.8
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 4.0e-38 162.5 111 67.6
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 4.0e-38 162.5 265 43.4
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 2.6e-37 159.8 109 68.8
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 1.2e-34 151.0 133 57.9
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 1.0e-33 147.9 79 84.8
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.3e-33 147.5 112 63.4
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 2.5e-32 143.3 288 37.8
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 6.1e-31 138.7 98 68.4
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 1.2e-23 114.4 118 51.7
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 1.6e-23 114.0 258 35.3
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 4.7e-23 112.5 230 38.7
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.0e-09 68.2 42 71.4
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 1.7e-09 67.4 41 73.2
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 4.3e-08 62.8 194 30.9
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 1.6e-07 60.8 199 30.2
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 3.6e-07 59.7 199 29.6
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 4.7e-07 59.3 44 59.1


User provided reference genes

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