Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0686600 Oryza sativa ssp. japonica HOM05D015271 ORTHO05D020944 1.9e-95 352.8 219 100.0
Os03g0320600 Oryza sativa ssp. japonica HOM05D015271 ORTHO05D020944 6.5e-16 88.6 241 38.2
Zm00001eb015250 Zea mays HOM05D015271 ORTHO05D020944 2.1e-14 83.6 219 42.0
Zm00001eb111780 Zea mays HOM05D015271 ORTHO05D020944 8.0e-14 81.6 225 48.9
Zm00001eb395510 Zea mays HOM05D015271 ORTHO05D020944 1.4e-13 80.9 224 36.2
Zm00001eb381650 Zea mays HOM05D015271 ORTHO05D020944 1.5e-07 60.8 73 57.5
HPP92_028709 Vanilla planifolia HOM05D004369 ORTHO05D004907 1.9e-07 60.5 39 74.4
PGR142G3989 Punica granatum HOM05D004369 ORTHO05D004907 2.5e-07 60.1 78 43.6
Migut.J01607 Erythranthe guttata HOM05D004369 ORTHO05D004907 4.3e-07 59.3 67 50.7
Lsat_1_v5_gn_8_109221 Lactuca sativa HOM05D004369 ORTHO05D004907 4.3e-07 59.3 130 36.9
Prupe.6G310500 Prunus persica HOM05D004369 ORTHO05D004907 4.3e-07 59.3 75 44.0
Manes.08G065900 Manihot esculenta HOM05D004369 ORTHO05D004907 5.6e-07 58.9 93 40.9
Cfa019946 Carpinus fangiana HOM05D004369 ORTHO05D004907 7.3e-07 58.5 53 54.7
Zm00001eb381640 Zea mays HOM05D015271 ORTHO05D020944 7.3e-07 58.5 61 62.3
MSTRG.19768 Avicennia marina HOM05D004369 ORTHO05D004907 9.5e-07 58.2 117 39.3
EL10Ac3g07333 Beta vulgaris HOM05D004369 ORTHO05D004907 9.5e-07 58.2 56 51.8
Cpa.g.sc33.191 Carica papaya HOM05D004369 ORTHO05D004907 9.5e-07 58.2 100 43.0
Potri.016G029600 Populus trichocarpa HOM05D004369 ORTHO05D004907 9.5e-07 58.2 95 41.1
Sabra16G0033500 Salix brachista HOM05D004369 ORTHO05D004907 9.5e-07 58.2 110 40.0
Aqoxy2G00033 Aquilegia oxysepala HOM05D004369 ORTHO05D004907 1.2e-06 57.8 53 58.5
ClCG10G016480 Citrullus lanatus HOM05D004369 ORTHO05D004907 1.2e-06 57.8 113 38.9
Lalb_Chr04g0253171 Lupinus albus HOM05D001711 ORTHO05D002211 1.2e-06 57.8 100 40.0
Os06g0666400 Oryza sativa ssp. japonica HOM05D001711 ORTHO05D002847 1.2e-06 57.8 85 40.0
Ca_08356_v3 Cicer arietinum L. HOM05D004369 ORTHO05D004907 1.6e-06 57.4 152 32.9
MD04G1191900 Malus domestica HOM05D004369 ORTHO05D004907 1.6e-06 57.4 113 36.3
HPP92_014347 Vanilla planifolia HOM05D004369 ORTHO05D004907 1.6e-06 57.4 43 65.1
Haze_20292 Corylus avellana HOM05D004369 ORTHO05D004907 2.1e-06 57.0 90 42.2
Lsat_1_v5_gn_6_103400 Lactuca sativa HOM05D001711 ORTHO05D002211 2.1e-06 57.0 89 40.4
Manes.09G001100 Manihot esculenta HOM05D004369 ORTHO05D004907 2.1e-06 57.0 92 42.4
SalBow6G6868 Salvia bowleyana HOM05D004369 ORTHO05D004907 2.1e-06 57.0 40 70.0
Zm00001eb128970 Zea mays HOM05D004369 ORTHO05D004907 2.1e-06 57.0 107 40.2
TAR623G1559 Trochodendron aralioides HOM05D004369 ORTHO05D004907 2.8e-06 56.6 39 64.1
Ciclev10012618m.g Citrus clementina HOM05D004369 ORTHO05D004907 3.6e-06 56.2 82 41.5
Gohir.A01G192900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 3.6e-06 56.2 113 38.1
Gohir.D01G183200 Gossypium hirsutum HOM05D004369 ORTHO05D004907 3.6e-06 56.2 113 38.1
Gorai.002G226300 Gossypium raimondii HOM05D004369 ORTHO05D004907 3.6e-06 56.2 113 38.1
TWI74G0038 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 3.6e-06 56.2 110 36.4
CSS0041918 Camellia sinensis var. sinensis HOM05D004369 ORTHO05D004907 4.7e-06 55.8 102 40.2
RhsimUnG0020900 Rhododendron simsii HOM05D004369 ORTHO05D004907 4.7e-06 55.8 120 39.2
Zm00001eb233250 Zea mays HOM05D001711 ORTHO05D002847 4.7e-06 55.8 69 49.3
Lj1g0025044 Lotus japonicus HOM05D004369 ORTHO05D004907 6.1e-06 55.5 118 39.0
Phvul.001G116900 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 6.1e-06 55.5 128 35.9
Phvul.002G069001 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 6.1e-06 55.5 128 35.9


User provided reference genes

Program Settings