Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0675133 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 6.6e-166 587.4 323 100.0
Zm00001eb330510 Zea mays HOM05D009637 ORTHO05D012223 3.0e-41 173.3 210 56.2
Os01g0312600 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.2e-29 134.8 114 72.8
Zm00001eb014040 Zea mays HOM05D009637 ORTHO05D012223 3.8e-28 129.8 304 40.8
Os01g0254350 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 4.2e-27 126.3 185 50.8
Os01g0234433 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 5.3e-22 109.4 113 59.3
Os02g0783050 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 6.9e-22 109.0 167 47.3
Os01g0788451 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.3e-17 94.7 112 58.0
SGA_v2.0_scaffold80G25679 Striga asiatica HOM05D009637 ORTHO05D012223 1.5e-13 81.3 194 38.7
SGA_v2.0_scaffold71G23926 Striga asiatica HOM05D009637 ORTHO05D012223 2.0e-13 80.9 114 51.8
unitig_51.g30985 Utricularia gibba HOM05D009637 ORTHO05D012223 5.9e-13 79.3 99 53.5
SGA_v2.0_scaffold1G00352 Striga asiatica HOM05D009637 ORTHO05D012223 1.1e-11 75.1 105 54.3
MELO3C030878.2 Cucumis melo HOM05D009637 ORTHO05D012223 1.6e-10 71.2 99 46.5
Os08g0449901 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D050074 2.1e-10 70.9 198 36.4
Os04g0641250 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 5.1e-09 66.2 102 50.0
FAN27G0990 Fragaria x ananassa HOM05D009637 ORTHO05D012223 2.5e-08 63.9 75 60.0
Sc08g0009140 Simmondsia chinensis HOM05D009637 ORTHO05D012223 7.4e-08 62.4 91 49.5
Os01g0880350 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.4e-06 58.2 115 45.2
Os09g0545550 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.8e-06 57.8 105 45.7


User provided reference genes

Program Settings