Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0649800 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 1.4e-93 346.3 172 100.0
Os07g0653050 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 8.6e-88 327.0 170 95.3
Os07g0543500 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 8.6e-72 273.9 169 78.7
Os07g0654700 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 2.0e-68 262.7 172 75.6
Os07g0650600 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 8.4e-67 257.3 172 75.6
Os07g0654900 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 1.1e-66 256.9 172 74.4
Os07g0651600 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 7.8e-65 250.8 172 73.3
Os07g0655201 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 1.5e-63 246.5 170 71.8
Os07g0649300 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 1.3e-56 223.4 170 62.9
Os07g0649100 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 4.3e-55 218.4 172 62.2
Os07g0651800 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 4.5e-52 208.4 159 68.6
Os07g0650100 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 7.1e-50 201.1 158 63.9
Os07g0653900 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 1.2e-49 200.3 158 63.3
Os07g0648900 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 8.7e-48 194.1 175 57.7
Os07g0649500 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 1.1e-47 193.7 172 57.0
Os07g0650200 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 4.2e-42 175.3 158 57.6
Os07g0654450 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 7.4e-39 164.5 105 74.3
Os07g0648233 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D013341 1.1e-37 160.6 165 48.5
Os01g0618300 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D295250 1.2e-17 94.0 146 36.3
HPP92_011327 Vanilla planifolia HOM05D002181 ORTHO05D003287 2.4e-13 79.7 136 34.6
Manes.15G021700 Manihot esculenta HOM05D002181 ORTHO05D003287 2.0e-12 76.6 155 31.6
CAN.G522.5 Capsicum annuum HOM05D002181 ORTHO05D003287 1.0e-11 74.3 161 32.9
Actinidia00080 Actinidia chinensis HOM05D002181 ORTHO05D003287 1.3e-11 73.9 149 31.5
BolC6t36900H Brassica oleracea HOM05D002181 ORTHO05D003287 1.3e-11 73.9 161 30.4
PGSC0003DMG400004356 Solanum tuberosum HOM05D002181 ORTHO05D003287 2.9e-11 72.8 149 32.9
BcaC08g44283 Brassica carinata HOM05D002181 ORTHO05D003287 3.8e-11 72.4 161 30.4
C06p17010 Brassica napus HOM05D002181 ORTHO05D003287 3.8e-11 72.4 161 30.4
BraA05t20572Z Brassica rapa HOM05D002181 ORTHO05D003287 3.8e-11 72.4 161 29.8
Ca_00611_v3 Cicer arietinum L. HOM05D002181 ORTHO05D003287 3.8e-11 72.4 138 31.9
Rhsim02G0018600 Rhododendron simsii HOM05D002181 ORTHO05D003287 3.8e-11 72.4 148 31.1
Sopen01g032050 Solanum pennellii HOM05D002181 ORTHO05D003287 3.8e-11 72.4 161 31.7
ATR0626G280 Amborella trichopoda HOM05D002181 ORTHO05D003287 5.0e-11 72.0 149 32.2
Nitab4.5_0006569g0010 Nicotiana tabacum HOM05D002181 ORTHO05D003287 5.0e-11 72.0 149 32.2
Solyc01g080260.3 Solanum lycopersicum HOM05D002181 ORTHO05D003287 5.0e-11 72.0 149 32.2
A05p16680 Brassica napus HOM05D002181 ORTHO05D003287 8.5e-11 71.2 161 29.8
HanXRQChr03g0071481 Helianthus annuus HOM05D002181 ORTHO05D003287 8.5e-11 71.2 139 35.3
Lalb_Chr13g0304041 Lupinus albus HOM05D002181 ORTHO05D003287 8.5e-11 71.2 139 30.9
THA.LOC104822317 Tarenaya hassleriana HOM05D002181 ORTHO05D003287 8.5e-11 71.2 138 30.4
vmacro15296 Vaccinium macrocarpon HOM05D002181 ORTHO05D003287 8.5e-11 71.2 138 32.6
BcaB07g33057 Brassica carinata HOM05D002181 ORTHO05D003287 1.1e-10 70.9 162 28.4
Nitab4.5_0000732g0170 Nicotiana tabacum HOM05D002181 ORTHO05D003287 1.9e-10 70.1 149 31.5
CARHR220450 Cardamine hirsuta HOM05D002181 ORTHO05D003287 3.2e-10 69.3 138 30.4
ECA240G1007 Erigeron canadensis HOM05D002181 ORTHO05D003287 3.2e-10 69.3 157 31.8
Psat1g184800 Pisum sativum HOM05D002181 ORTHO05D003287 3.2e-10 69.3 148 29.7
Sp7g12290 Schrenkiella parvula HOM05D002181 ORTHO05D003287 3.2e-10 69.3 161 29.2
Medtr2g021310 Medicago truncatula HOM05D002181 ORTHO05D003287 4.2e-10 68.9 150 29.3
Nn4g26158 Nelumbo nucifera HOM05D002181 ORTHO05D003287 4.2e-10 68.9 148 32.4
Os01g0524100 Oryza sativa ssp. japonica HOM05D002181 ORTHO05D037031 4.2e-10 68.9 126 34.9
SEGI_27106 Sequoiadendron giganteum HOM05D002181 ORTHO05D003287 4.2e-10 68.9 163 31.9
Dinv38368 Davidia involucrata HOM05D002181 ORTHO05D003287 7.2e-10 68.2 138 31.2
Phvul.003G096100 Phaseolus vulgaris HOM05D002181 ORTHO05D003287 7.2e-10 68.2 161 29.2
Rhsim02G0018700 Rhododendron simsii HOM05D002181 ORTHO05D003287 7.2e-10 68.2 138 31.9
ClCG05G005510 Citrullus lanatus HOM05D002181 ORTHO05D003287 9.4e-10 67.8 140 32.1
MELO3C006576.2 Cucumis melo HOM05D002181 ORTHO05D003287 9.4e-10 67.8 141 31.2
Lj6g0002777 Lotus japonicus HOM05D002181 ORTHO05D003287 9.4e-10 67.8 150 28.0
VMungo1215G1039 Vigna mungo HOM05D002181 ORTHO05D003287 9.4e-10 67.8 161 29.8
Aqoxy5G00542 Aquilegia oxysepala HOM05D002181 ORTHO05D003287 1.2e-09 67.4 138 31.2
CARHR220440 Cardamine hirsuta HOM05D002181 ORTHO05D003287 2.1e-09 66.6 162 29.6
SEGI_37943 Sequoiadendron giganteum HOM05D002181 ORTHO05D003287 2.1e-09 66.6 163 30.7
Glyma.13G210500 Glycine max HOM05D002181 ORTHO05D003287 2.7e-09 66.2 138 30.4
Lj3A804G34 Lonicera japonica HOM05D002181 ORTHO05D003287 2.7e-09 66.2 141 30.5
Sabra08G0160700 Salix brachista HOM05D002181 ORTHO05D003287 2.7e-09 66.2 146 28.1
SEGI_16830 Sequoiadendron giganteum HOM05D002181 ORTHO05D003287 3.6e-09 65.9 161 29.8
Glyma.15G102300 Glycine max HOM05D002181 ORTHO05D003287 6.1e-09 65.1 138 29.7
VMungo0540G1789 Vigna mungo HOM05D002181 ORTHO05D003287 6.1e-09 65.1 148 29.7
Actinidia23465 Actinidia chinensis HOM05D002181 ORTHO05D003287 1.0e-08 64.3 138 31.2
arahy.Tifrunner.gnm1.ann1.2LK8AA Arachis hypogaea HOM05D002181 ORTHO05D003287 1.0e-08 64.3 139 28.8
Potri.008G200500 Populus trichocarpa HOM05D002181 ORTHO05D003287 1.0e-08 64.3 161 26.1
Rhsim02G0018300 Rhododendron simsii HOM05D002181 ORTHO05D003287 1.0e-08 64.3 138 29.7
SEGI_24489 Sequoiadendron giganteum HOM05D002181 ORTHO05D003287 1.0e-08 64.3 146 31.5
Aa31LG11G10750 Aethionema arabicum HOM05D002181 ORTHO05D003287 1.4e-08 63.9 151 29.1
AL7G42010 Arabidopsis lyrata HOM05D002181 ORTHO05D003287 1.4e-08 63.9 164 30.5
AT4G14280 Arabidopsis thaliana HOM05D002181 ORTHO05D003287 1.4e-08 63.9 163 28.8
arahy.Tifrunner.gnm1.ann1.A86KKQ Arachis hypogaea HOM05D002181 ORTHO05D003287 1.4e-08 63.9 139 28.8
AT3G06210 Arabidopsis thaliana HOM05D002181 ORTHO05D003287 1.8e-08 63.5 149 29.5
CsaV3_3G013830 Cucumis sativus L. HOM05D002181 ORTHO05D003287 1.8e-08 63.5 140 30.0
Glyma.07G255300 Glycine max HOM05D002181 ORTHO05D003287 1.8e-08 63.5 138 28.3
Rhsim02G0018800 Rhododendron simsii HOM05D002181 ORTHO05D003287 1.8e-08 63.5 153 31.4
Sed0009038 Sechium edule HOM05D002181 ORTHO05D003287 2.3e-08 63.2 140 28.6
AL6G30330 Arabidopsis lyrata HOM05D002181 ORTHO05D003287 3.0e-08 62.8 150 29.3
BolC5t34763H Brassica oleracea HOM05D002181 ORTHO05D003287 3.0e-08 62.8 148 29.7
Prupe.1G148900 Prunus persica HOM05D002181 ORTHO05D003287 3.0e-08 62.8 148 30.4
AL3G17070 Arabidopsis lyrata HOM05D002181 ORTHO05D003287 3.9e-08 62.4 149 29.5
Thhalv10027455m.g Eutrema salsugineum HOM05D002181 ORTHO05D003287 3.9e-08 62.4 161 29.2
vmacro08252 Vaccinium macrocarpon HOM05D002181 ORTHO05D003287 3.9e-08 62.4 138 29.7
Cc03_g02970 Coffea canephora HOM05D002181 ORTHO05D003287 5.2e-08 62.0 138 31.2
Rhsim02G0018500 Rhododendron simsii HOM05D002181 ORTHO05D003287 5.2e-08 62.0 138 29.7
AT5G18980 Arabidopsis thaliana HOM05D002181 ORTHO05D003287 8.8e-08 61.2 151 29.1
Carub.0007s2803 Capsella rubella HOM05D002181 ORTHO05D003287 8.8e-08 61.2 162 27.8
ECA236G3749 Erigeron canadensis HOM05D002181 ORTHO05D003287 8.8e-08 61.2 141 28.4
THA.LOC104808657 Tarenaya hassleriana HOM05D002181 ORTHO05D003287 8.8e-08 61.2 158 29.1
BcaC05g29794 Brassica carinata HOM05D002181 ORTHO05D003287 2.0e-07 60.1 138 30.4
C05p61060 Brassica napus HOM05D002181 ORTHO05D003287 2.0e-07 60.1 138 30.4
Carub.0003s0565 Capsella rubella HOM05D002181 ORTHO05D003287 2.0e-07 60.1 138 29.7
C09p57520 Brassica napus HOM05D002181 ORTHO05D003287 2.6e-07 59.7 150 29.3
Thhalv10020063m.g Eutrema salsugineum HOM05D002181 ORTHO05D003287 2.6e-07 59.7 149 28.9
HanXRQChr16g0510721 Helianthus annuus HOM05D002181 ORTHO05D003287 2.6e-07 59.7 138 28.3
AL7G42020 Arabidopsis lyrata HOM05D002181 ORTHO05D003287 3.3e-07 59.3 140 30.0
BcaC04g18634 Brassica carinata HOM05D002181 ORTHO05D003287 3.3e-07 59.3 150 29.3
BolC9t58619H Brassica oleracea HOM05D002181 ORTHO05D003287 3.3e-07 59.3 150 29.3
Phvul.006G155500 Phaseolus vulgaris HOM05D002181 ORTHO05D003287 3.3e-07 59.3 138 29.0
CARHR194020 Cardamine hirsuta HOM05D002181 ORTHO05D003287 4.4e-07 58.9 150 28.0
A05p41810 Brassica napus HOM05D002181 ORTHO05D003287 5.7e-07 58.5 124 31.5
BraA05t22900Z Brassica rapa HOM05D002181 ORTHO05D003287 5.7e-07 58.5 124 31.5
Cpa.g.sc16.48 Carica papaya HOM05D002181 ORTHO05D003287 5.7e-07 58.5 109 33.9
Carub.0006s1728 Capsella rubella HOM05D002181 ORTHO05D003287 7.4e-07 58.2 150 28.0
Thhalv10012681m.g Eutrema salsugineum HOM05D002181 ORTHO05D003287 7.4e-07 58.2 139 28.1
Ah.13g074340 Amaranthus hybridus HOM05D002181 ORTHO05D003287 9.7e-07 57.8 152 27.6
Sp6g25410 Schrenkiella parvula HOM05D002181 ORTHO05D003287 1.7e-06 57.0 150 28.0
A10p20700 Brassica napus HOM05D002181 ORTHO05D003287 2.2e-06 56.6 139 28.8
BraA10t44133Z Brassica rapa HOM05D002181 ORTHO05D003287 2.2e-06 56.6 139 28.8
vmacro15297 Vaccinium macrocarpon HOM05D002181 ORTHO05D003287 2.2e-06 56.6 125 29.6
BcaC05g30048 Brassica carinata HOM05D002181 ORTHO05D003287 2.8e-06 56.2 149 28.2
BcaB08g36630 Brassica carinata HOM05D002181 ORTHO05D003287 4.8e-06 55.5 150 28.7
Ah.07g204080 Amaranthus hybridus HOM05D002181 ORTHO05D003287 8.2e-06 54.7 155 26.5


User provided reference genes

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