Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.0e-146 522.7 261 100.0
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 7.6e-130 467.6 256 90.6
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 5.0e-113 411.8 261 75.9
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 3.2e-112 409.1 257 76.3
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 2.1e-111 406.4 255 75.7
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 3.6e-111 405.6 258 76.4
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 3.6e-111 405.6 252 77.4
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 2.3e-110 402.9 252 77.4
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 3.0e-110 402.5 257 76.3
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 3.0e-110 402.5 257 76.3
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 5.1e-110 401.7 256 75.8
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 8.8e-110 401.0 257 75.9
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 8.8e-110 401.0 257 75.9
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 1.1e-109 400.6 256 75.4
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 1.1e-109 400.6 257 75.9
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 1.5e-109 400.2 256 75.4
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 2.5e-109 399.4 252 77.0
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 2.5e-109 399.4 252 76.2
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 3.3e-109 399.1 257 75.5
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 3.3e-109 399.1 257 75.5
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 4.3e-109 398.7 252 76.2
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 4.3e-109 398.7 247 76.1
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 4.3e-109 398.7 252 77.4
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 4.3e-109 398.7 252 76.2
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 4.3e-109 398.7 252 76.2
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 5.7e-109 398.3 258 74.0
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 7.4e-109 397.9 252 76.2
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 7.4e-109 397.9 254 74.8
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 9.7e-109 397.5 252 75.4
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.3e-108 397.1 256 74.6
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.3e-108 397.1 252 75.8
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 1.7e-108 396.7 252 74.2
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 2.2e-108 396.4 260 74.2
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 2.8e-108 396.0 256 75.8
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 2.8e-108 396.0 252 75.4
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 2.8e-108 396.0 256 74.6
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 2.8e-108 396.0 255 75.3
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 3.7e-108 395.6 257 73.9
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 3.7e-108 395.6 256 74.6
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 3.7e-108 395.6 252 75.4
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 4.8e-108 395.2 252 74.6
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 6.3e-108 394.8 251 76.5
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 8.2e-108 394.4 252 76.2
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 1.1e-107 394.0 253 74.7
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.1e-107 394.0 257 74.3
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.4e-107 393.7 257 72.4
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 1.4e-107 393.7 252 74.2
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 3.1e-107 392.5 259 73.0
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 4.1e-107 392.1 257 72.0
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 5.3e-107 391.7 252 74.6
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 5.3e-107 391.7 248 75.4
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.3e-107 391.7 252 75.8
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 5.3e-107 391.7 252 75.8
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 6.9e-107 391.3 255 73.7
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 9.1e-107 391.0 260 72.7
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 9.1e-107 391.0 252 74.2
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.5e-106 390.2 248 75.0
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 2.0e-106 389.8 255 73.7
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 2.0e-106 389.8 255 73.7
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 2.0e-106 389.8 257 71.6
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 3.4e-106 389.0 256 74.2
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 4.5e-106 388.7 257 73.5
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 4.5e-106 388.7 253 73.9
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.7e-106 387.9 252 75.4
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 7.7e-106 387.9 252 75.0
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.3e-105 387.1 244 76.2
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 1.3e-105 387.1 257 72.8
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 1.7e-105 386.7 253 72.3
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.7e-105 386.7 255 72.5
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.7e-105 386.7 252 74.2
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 2.2e-105 386.3 255 71.8
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 2.2e-105 386.3 261 72.4
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.1e-104 384.0 251 73.3
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 1.4e-104 383.6 257 72.4
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 4.2e-104 382.1 257 71.2
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 4.2e-104 382.1 245 73.9
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 7.2e-104 381.3 248 73.4
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 9.4e-104 380.9 252 72.2
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 1.2e-103 380.6 248 74.2
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.7e-103 379.4 240 74.6
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 2.7e-103 379.4 252 72.2
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 4.7e-103 378.6 255 71.8
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 3.0e-102 375.9 258 70.9
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 5.1e-102 375.2 256 71.5
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 6.7e-102 374.8 256 71.5
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 6.7e-102 374.8 256 71.5
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 6.7e-102 374.8 256 71.5
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 6.7e-102 374.8 256 71.5
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 6.7e-102 374.8 251 72.5
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 5.7e-101 371.7 254 70.9
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 7.4e-101 371.3 304 61.8
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 9.7e-101 370.9 239 72.8
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 1.3e-100 370.5 254 70.5
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 1.7e-100 370.2 254 70.5
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.7e-100 370.2 256 71.1
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 1.1e-99 367.5 254 70.5
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.8e-99 366.7 254 70.1
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 3.1e-99 365.9 252 69.8
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 4.1e-99 365.5 254 69.7
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.2e-98 364.0 246 71.5
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 2.1e-95 353.2 330 55.5
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 1.8e-94 350.1 239 68.6
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 5.2e-94 348.6 225 74.2
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 1.2e-90 337.4 221 73.8
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 4.5e-90 335.5 268 63.8
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 5.9e-90 335.1 220 72.3
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 4.2e-88 328.9 253 65.2
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.3e-84 317.4 262 62.6
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 2.0e-82 310.1 250 58.0
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 1.3e-73 280.8 252 56.7
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 5.6e-72 275.4 219 63.9
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 4.0e-70 269.2 252 57.1
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 5.6e-64 248.8 255 55.7
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 1.5e-61 240.7 255 46.3
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 4.1e-59 232.6 236 48.7
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 1.2e-58 231.1 256 44.9
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 3.1e-54 216.5 252 43.3
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 4.0e-54 216.1 216 55.1
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.5e-53 214.2 131 76.3
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 2.0e-53 213.8 131 77.1
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 3.4e-53 213.0 149 67.1
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.3e-49 201.1 126 74.6
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 1.7e-49 200.7 245 40.4
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.2e-47 194.5 174 60.9
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 4.7e-47 192.6 131 68.7
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.8e-46 190.7 125 76.0
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.8e-46 190.7 125 76.0
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.6e-45 186.8 109 79.8
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 3.8e-44 183.0 120 75.0
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 1.1e-40 171.4 236 37.3
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 9.6e-40 168.3 239 39.7
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 4.5e-29 132.9 89 76.4
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 2.2e-28 130.6 215 34.4
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 1.4e-27 127.9 100 62.0
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 3.4e-21 106.7 74 67.6
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 7.6e-21 105.5 73 67.1
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 9.9e-21 105.1 73 67.1
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 6.4e-20 102.4 65 70.8
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 2.4e-19 100.5 65 69.2
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 5.5e-19 99.4 65 69.2
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 1.1e-16 91.7 57 71.9
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 1.1e-16 91.7 57 71.9
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 1.1e-16 91.7 57 71.9
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 4.3e-16 89.7 57 68.4
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 6.9e-14 82.4 81 51.9
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 6.9e-14 82.4 51 72.5
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 7.6e-13 79.0 154 33.8
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 1.7e-12 77.8 46 71.7
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.1e-11 75.1 51 66.7
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 1.9e-11 74.3 46 71.7
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.5e-08 64.7 53 58.5
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.1e-06 57.0 68 48.5


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