Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0570600 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D294285 5.5e-48 194.1 109 100.0
Nn1g02258 Nelumbo nucifera HOM05D000098 ORTHO05D001077 6.0e-10 67.8 42 66.7
Os03g0807500 Oryza sativa ssp. japonica HOM05D000098 ORTHO05D001077 1.9e-08 62.8 42 61.9
Zm00001eb324900 Zea mays HOM05D000098 ORTHO05D001077 7.3e-08 60.8 43 62.8
PSO210G2588 Papaver somniferum HOM05D000098 ORTHO05D001077 3.6e-07 58.5 39 61.5
Lj5g0000772 Lotus japonicus HOM05D000098 ORTHO05D001077 4.7e-07 58.2 37 62.2
PSO782G3040 Papaver somniferum HOM05D000098 ORTHO05D001077 6.2e-07 57.8 39 61.5
PSO782G4727 Papaver somniferum HOM05D000098 ORTHO05D001077 6.2e-07 57.8 39 61.5
Zm00001eb061740 Zea mays HOM05D000098 ORTHO05D001077 1.1e-06 57.0 42 52.4
Potri.006G259101 Populus trichocarpa HOM05D000098 ORTHO05D001077 2.3e-06 55.8 35 65.7
Sabra02G0123500 Salix brachista HOM05D000098 ORTHO05D001077 3.1e-06 55.5 35 65.7
HPP92_010134 Vanilla planifolia HOM05D000098 ORTHO05D001077 3.1e-06 55.5 43 53.5
Aqoxy5G00496 Aquilegia oxysepala HOM05D000098 ORTHO05D001077 6.8e-06 54.3 42 52.4
Potri.006G259000 Populus trichocarpa HOM05D000098 ORTHO05D001077 6.8e-06 54.3 35 62.9
HPP92_000814 Vanilla planifolia HOM05D000098 ORTHO05D001077 6.8e-06 54.3 37 56.8
Zm00001eb212510 Zea mays HOM05D000098 ORTHO05D001077 6.8e-06 54.3 42 50.0
arahy.Tifrunner.gnm1.ann1.5LRS2Q Arachis hypogaea HOM05D000098 ORTHO05D001077 8.9e-06 53.9 34 58.8
arahy.Tifrunner.gnm1.ann1.AY9ABC Arachis hypogaea HOM05D000098 ORTHO05D001077 8.9e-06 53.9 34 58.8
AUR62038632 Chenopodium quinoa HOM05D000098 ORTHO05D001077 8.9e-06 53.9 38 57.9
PSO478G3063 Papaver somniferum HOM05D000098 ORTHO05D001077 8.9e-06 53.9 39 56.4
Sabra02G0124000 Salix brachista HOM05D000098 ORTHO05D001077 8.9e-06 53.9 35 62.9
Sabra06G0202500 Salix brachista HOM05D000098 ORTHO05D001077 8.9e-06 53.9 35 65.7


User provided reference genes

Program Settings