Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0474300 Oryza sativa ssp. japonica HOM05D033341 ORTHO05D036979 2.3e-126 455.7 249 100.0
Zm00001eb104870 Zea mays HOM05D033341 ORTHO05D036979 9.0e-38 161.4 320 46.6
Zm00001eb320020 Zea mays HOM05D033341 ORTHO05D036979 5.7e-32 142.1 313 44.7
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 4.1e-14 82.8 221 40.7
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 8.5e-12 75.1 250 38.8
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.2e-11 72.8 186 38.2
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 2.7e-10 70.1 247 36.0
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.6e-10 69.7 244 34.4
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 6.1e-10 68.9 225 37.3
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.0e-09 68.2 244 35.2
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.4e-09 67.8 241 35.7
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.8e-09 67.4 244 34.0
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.0e-09 66.2 240 35.4
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.2e-08 64.7 242 34.7
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.2e-08 64.7 218 37.2
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 1.5e-08 64.3 210 33.8
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 3.3e-08 63.2 248 36.7
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 4.4e-08 62.8 216 35.6
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 5.7e-08 62.4 189 35.4
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 9.7e-08 61.6 247 35.2
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.7e-07 60.8 211 34.1
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 2.8e-07 60.1 249 34.5
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 4.8e-07 59.3 191 32.5
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 4.8e-07 59.3 220 33.6
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 4.8e-07 59.3 104 46.2
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 6.3e-07 58.9 227 35.7
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 6.3e-07 58.9 239 34.7
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 8.2e-07 58.5 243 33.7
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 2.4e-06 57.0 245 34.7
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 2.4e-06 57.0 217 35.0
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 3.1e-06 56.6 255 34.9
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 4.1e-06 56.2 248 35.5
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 4.1e-06 56.2 216 34.7
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 4.1e-06 56.2 237 33.3
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 5.3e-06 55.8 241 33.6
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.3e-06 55.8 248 31.5
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 5.3e-06 55.8 247 33.6
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 7.0e-06 55.5 245 32.2
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 7.0e-06 55.5 247 34.4


User provided reference genes

Program Settings