Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 8.4e-102 373.6 181 100.0
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 3.9e-91 338.2 174 89.7
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 6.5e-78 294.3 170 75.9
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 6.5e-78 294.3 177 77.4
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 8.5e-78 293.9 170 77.6
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 1.4e-77 293.1 171 77.2
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 1.9e-77 292.7 169 78.7
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 1.9e-77 292.7 169 78.7
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 2.5e-77 292.4 167 77.8
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 3.2e-77 292.0 172 75.6
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 3.2e-77 292.0 172 75.6
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 4.2e-77 291.6 172 76.2
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 1.2e-76 290.0 169 76.3
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 1.2e-76 290.0 178 73.6
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 1.6e-76 289.7 169 76.3
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 2.7e-76 288.9 169 76.9
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 3.6e-76 288.5 171 74.9
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 6.1e-76 287.7 168 79.2
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 6.1e-76 287.7 169 75.1
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 6.1e-76 287.7 169 76.3
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 1.0e-75 287.0 174 73.6
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 2.3e-75 285.8 177 72.3
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 2.3e-75 285.8 170 75.3
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 2.3e-75 285.8 172 73.8
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 2.3e-75 285.8 170 74.7
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 3.0e-75 285.4 174 73.0
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 3.0e-75 285.4 169 75.1
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 3.0e-75 285.4 169 76.3
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 3.9e-75 285.0 168 76.2
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 5.1e-75 284.6 169 75.1
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 5.1e-75 284.6 169 74.6
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 5.1e-75 284.6 169 76.3
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 6.7e-75 284.3 169 75.1
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 8.8e-75 283.9 173 75.1
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 1.1e-74 283.5 170 75.3
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 1.5e-74 283.1 169 74.0
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.5e-74 283.1 169 74.0
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 1.5e-74 283.1 174 73.6
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 2.0e-74 282.7 170 72.9
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 2.0e-74 282.7 176 72.7
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.0e-74 282.7 169 74.0
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 2.0e-74 282.7 176 72.2
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 2.6e-74 282.3 170 72.9
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 2.6e-74 282.3 169 74.6
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 3.3e-74 282.0 172 73.8
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 3.3e-74 282.0 177 71.8
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 4.4e-74 281.6 178 72.5
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 4.4e-74 281.6 168 73.8
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 5.7e-74 281.2 169 74.0
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 7.4e-74 280.8 170 72.9
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 7.4e-74 280.8 174 72.4
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 7.4e-74 280.8 166 75.3
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 7.4e-74 280.8 176 71.0
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 7.4e-74 280.8 168 73.8
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 9.7e-74 280.4 177 72.9
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 1.3e-73 280.0 167 74.3
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 1.7e-73 279.6 174 73.0
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 2.2e-73 279.3 167 73.7
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 2.8e-73 278.9 166 74.7
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 2.8e-73 278.9 174 72.4
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 3.7e-73 278.5 169 72.8
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 3.7e-73 278.5 177 71.2
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 6.3e-73 277.7 178 70.8
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 6.3e-73 277.7 168 73.2
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 8.2e-73 277.3 171 73.1
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 8.2e-73 277.3 178 73.6
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 1.1e-72 276.9 170 73.5
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 1.4e-72 276.6 171 70.2
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 2.4e-72 275.8 168 73.2
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 3.1e-72 275.4 169 72.2
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 3.1e-72 275.4 177 70.1
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 4.1e-72 275.0 175 72.0
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 7.0e-72 274.2 177 70.6
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 9.1e-72 273.9 168 73.2
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 1.2e-71 273.5 177 70.6
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 1.2e-71 273.5 167 73.7
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 1.5e-71 273.1 166 73.5
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 1.5e-71 273.1 167 73.7
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 1.5e-71 273.1 166 71.7
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 1.5e-71 273.1 166 71.7
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 2.0e-71 272.7 177 69.5
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 2.0e-71 272.7 168 72.6
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 2.6e-71 272.3 177 70.1
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 2.6e-71 272.3 173 74.6
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 3.5e-71 271.9 168 70.2
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 4.5e-71 271.6 177 70.1
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 4.5e-71 271.6 177 68.9
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 4.5e-71 271.6 175 70.3
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 4.5e-71 271.6 168 72.6
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 4.5e-71 271.6 175 70.9
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 5.9e-71 271.2 177 70.6
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 5.9e-71 271.2 177 68.9
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 7.7e-71 270.8 177 68.4
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 1.0e-70 270.4 169 70.4
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 1.0e-70 270.4 174 68.4
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 1.3e-70 270.0 176 68.8
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.2e-70 269.2 162 74.1
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 2.2e-70 269.2 169 70.4
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 2.2e-70 269.2 171 70.2
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 3.8e-70 268.5 174 69.0
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 5.0e-70 268.1 166 70.5
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 1.1e-69 266.9 167 72.5
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 1.9e-69 266.2 201 62.7
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 2.5e-69 265.8 167 71.9
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 2.5e-69 265.8 167 68.9
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 4.2e-69 265.0 161 74.5
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 4.2e-69 265.0 161 74.5
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 5.5e-69 264.6 189 65.6
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 5.5e-69 264.6 173 70.5
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 5.5e-69 264.6 178 68.5
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 2.1e-68 262.7 161 73.3
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 2.1e-68 262.7 161 73.3
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 2.7e-68 262.3 177 67.8
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 4.7e-68 261.5 171 70.2
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 8.0e-68 260.8 163 73.0
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 3.9e-67 258.5 163 70.6
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 3.9e-67 258.5 169 67.5
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 1.5e-66 256.5 178 66.9
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 1.5e-66 256.5 154 72.7
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 5.7e-66 254.6 238 53.8
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.1e-64 250.4 157 73.2
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 1.4e-64 250.0 168 66.1
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 5.9e-63 244.6 161 70.2
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 1.0e-62 243.8 166 67.5
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 2.9e-62 242.3 169 69.2
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 5.0e-62 241.5 168 63.1
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 1.1e-61 240.4 180 63.3
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 2.1e-60 236.1 171 60.8
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 1.4e-59 233.4 167 64.1
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 2.0e-58 229.6 169 60.9
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 2.2e-57 226.1 167 59.9
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 2.2e-57 226.1 174 59.8
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 4.8e-57 224.9 169 59.2
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 4.5e-55 218.4 168 62.5
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 1.9e-53 213.0 166 56.6
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 2.3e-46 189.5 108 75.9
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 1.1e-45 187.2 122 69.7
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 1.6e-44 183.3 173 49.1
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 1.2e-42 177.2 109 72.5
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.8e-42 174.1 111 69.4
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 1.4e-40 170.2 106 71.7
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 7.8e-39 164.5 101 71.3
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 1.7e-38 163.3 103 72.8
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 1.7e-38 163.3 171 49.1
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 5.0e-38 161.8 101 72.3
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 1.6e-36 156.8 107 64.5
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 2.8e-36 156.0 101 70.3
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 1.8e-35 153.3 108 63.9
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 1.8e-35 153.3 108 63.9
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 4.0e-35 152.1 176 46.6
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 2.9e-33 146.0 85 77.6
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 7.8e-31 137.9 172 44.8
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 4.0e-27 125.6 73 74.0
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 7.5e-26 121.3 157 36.3
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 1.9e-24 116.7 137 48.9
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 2.1e-23 113.2 123 48.8
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 7.3e-21 104.8 66 74.2
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 5.8e-18 95.1 63 65.1
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 1.4e-16 90.5 180 28.3
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 2.3e-14 83.2 79 49.4
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 2.8e-12 76.3 60 53.3
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 3.1e-11 72.8 61 54.1
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 4.0e-11 72.4 62 50.0
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 2.6e-10 69.7 35 85.7
vmacro14074 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 2.7e-07 59.7 48 58.3


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