Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.9e-161 572.4 283 100.0
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 6.5e-109 397.9 246 76.0
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 2.5e-108 396.0 246 76.8
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 4.2e-108 395.2 246 77.2
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.6e-107 393.3 246 76.0
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 2.7e-107 392.5 246 76.0
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 3.6e-107 392.1 246 76.4
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 4.7e-107 391.7 246 74.8
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 4.7e-107 391.7 246 76.0
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 8.0e-107 391.0 246 75.2
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 8.0e-107 391.0 246 73.6
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.4e-106 390.2 246 75.6
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 2.3e-106 389.4 246 75.2
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 2.3e-106 389.4 246 75.6
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 3.0e-106 389.0 246 74.8
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 3.0e-106 389.0 246 76.0
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 3.0e-106 389.0 246 75.2
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 3.0e-106 389.0 246 75.6
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 4.0e-106 388.7 252 73.4
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 4.0e-106 388.7 252 73.4
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 4.0e-106 388.7 252 73.4
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 4.0e-106 388.7 246 74.8
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 5.2e-106 388.3 246 74.8
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 5.2e-106 388.3 246 75.6
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 6.7e-106 387.9 246 75.2
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 6.7e-106 387.9 246 74.4
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 8.8e-106 387.5 252 73.0
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 8.8e-106 387.5 246 74.8
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 8.8e-106 387.5 246 74.4
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 8.8e-106 387.5 252 73.8
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.2e-105 387.1 245 75.9
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 1.2e-105 387.1 246 74.4
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 1.2e-105 387.1 249 75.1
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 1.5e-105 386.7 246 74.4
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 1.5e-105 386.7 246 74.4
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 2.6e-105 386.0 246 74.0
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 2.6e-105 386.0 246 75.2
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 3.3e-105 385.6 246 74.0
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 3.3e-105 385.6 246 74.0
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 4.4e-105 385.2 246 74.0
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 5.7e-105 384.8 246 74.0
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 5.7e-105 384.8 246 74.4
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 5.7e-105 384.8 246 74.4
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 5.7e-105 384.8 246 74.8
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 7.5e-105 384.4 246 74.8
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 7.5e-105 384.4 246 74.0
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 9.7e-105 384.0 246 74.0
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 1.3e-104 383.6 246 74.0
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.3e-104 383.6 246 74.0
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 1.3e-104 383.6 245 75.1
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.7e-104 383.3 246 74.0
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 2.2e-104 382.9 246 74.0
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.2e-104 382.9 246 73.6
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 2.2e-104 382.9 246 74.4
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 2.2e-104 382.9 248 73.4
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 2.2e-104 382.9 246 74.0
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 2.8e-104 382.5 246 75.2
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 3.7e-104 382.1 246 74.4
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 4.8e-104 381.7 252 71.8
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 8.2e-104 380.9 246 73.6
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 8.2e-104 380.9 246 72.0
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 1.1e-103 380.6 246 74.8
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.1e-103 380.6 246 73.6
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 1.8e-103 379.8 246 73.6
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.8e-103 379.8 246 74.8
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 2.4e-103 379.4 246 73.6
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 2.4e-103 379.4 246 73.6
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 9.1e-103 377.5 246 73.6
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 2.0e-102 376.3 246 72.8
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.5e-102 375.6 259 69.9
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 3.5e-102 375.6 246 72.0
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 7.7e-102 374.4 250 71.6
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 1.0e-101 374.0 246 73.2
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 1.7e-101 373.2 246 72.4
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 1.7e-101 373.2 246 72.4
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 2.9e-101 372.5 271 67.5
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 6.5e-101 371.3 246 72.0
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 2.5e-100 369.4 249 71.9
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 1.2e-99 367.1 273 67.0
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 2.7e-99 365.9 232 75.0
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.2e-97 360.5 237 73.8
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 7.0e-95 351.3 290 61.4
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 3.5e-94 349.0 246 70.7
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 8.6e-93 344.4 246 65.9
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.1e-92 344.0 248 69.0
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 5.5e-92 341.7 250 65.2
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 6.1e-91 338.2 219 74.0
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.7e-88 330.1 199 76.4
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 5.8e-81 305.1 246 63.8
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 1.6e-75 287.0 246 59.3
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.3e-69 267.3 281 49.1
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 1.5e-68 263.8 219 63.5
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 6.8e-66 255.0 212 61.8
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 2.0e-65 253.4 167 70.7
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 3.4e-65 252.7 153 75.8
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.4e-63 247.3 180 66.1
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 1.2e-62 244.2 153 73.2
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 3.6e-59 232.6 176 63.6
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 1.1e-58 231.1 154 66.2
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 3.1e-58 229.6 202 59.4
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 6.8e-58 228.4 270 49.3
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 1.2e-57 227.6 202 59.4
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 7.6e-57 224.9 248 50.4
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 7.6e-49 198.4 157 61.8
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 1.3e-40 171.0 277 43.7
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 9.3e-39 164.9 94 83.0
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 1.1e-28 131.3 213 41.8
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 1.3e-08 64.7 47 63.8


User provided reference genes

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