Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0229800 Oryza sativa ssp. japonica HOM05D006868 ORTHO05D008444 5.2e-92 341.3 202 100.0
Zm00001eb303710 Zea mays HOM05D006868 ORTHO05D008444 5.2e-52 208.4 189 68.3
Cpa.g.sc19.51 Carica papaya HOM05D006868 ORTHO05D008444 2.4e-41 172.9 112 73.2
Dinv21851 Davidia involucrata HOM05D006868 ORTHO05D008444 4.6e-40 168.7 112 71.4
Manes.07G142700 Manihot esculenta HOM05D006868 ORTHO05D008444 6.0e-40 168.3 112 71.4
PSO170G6852 Papaver somniferum HOM05D006868 ORTHO05D008444 7.8e-40 167.9 111 70.3
Cc02_g05320 Coffea canephora HOM05D006868 ORTHO05D008444 1.7e-39 166.8 112 71.4
Gorai.012G015200 Gossypium raimondii HOM05D006868 ORTHO05D008444 1.7e-39 166.8 115 69.6
THA.LOC104813883 Tarenaya hassleriana HOM05D006868 ORTHO05D008444 1.7e-39 166.8 112 70.5
Gohir.A05G402600 Gossypium hirsutum HOM05D006868 ORTHO05D008444 2.3e-39 166.4 115 68.7
TAR633G2670 Trochodendron aralioides HOM05D006868 ORTHO05D008444 2.3e-39 166.4 114 69.3
Phvul.008G185600 Phaseolus vulgaris HOM05D006868 ORTHO05D008444 3.0e-39 166.0 115 67.0
SalBow3G4174 Salvia bowleyana HOM05D006868 ORTHO05D008444 3.0e-39 166.0 112 71.4
EL10Ac2g02654 Beta vulgaris HOM05D006868 ORTHO05D008444 3.9e-39 165.6 111 69.4
GSVIVG01032665001 Vitis vinifera HOM05D000001 ORTHO05D008444 3.9e-39 165.6 112 69.6
Gohir.D04G012900 Gossypium hirsutum HOM05D006868 ORTHO05D008444 5.1e-39 165.2 115 68.7
PSO017G2385 Papaver somniferum HOM05D006868 ORTHO05D008444 5.1e-39 165.2 111 69.4
Migut.F00577 Erythranthe guttata HOM05D006868 ORTHO05D008444 6.6e-39 164.9 115 69.6
arahy.Tifrunner.gnm1.ann1.0CE3F9 Arachis hypogaea HOM05D006868 ORTHO05D008444 8.7e-39 164.5 114 69.3
Oeu054415.1 Olea europaea HOM05D006868 ORTHO05D008444 8.7e-39 164.5 112 69.6
VMungo0647G1252 Vigna mungo HOM05D006868 ORTHO05D008444 8.7e-39 164.5 112 67.0
CANSAT56G1982 Cannabis sativa HOM05D006868 ORTHO05D008444 1.1e-38 164.1 111 69.4
Duzib114G0133 Durio zibethinus HOM05D006868 ORTHO05D008444 1.1e-38 164.1 115 67.8
Thhalv10016719m.g Eutrema salsugineum HOM05D006868 ORTHO05D008444 1.1e-38 164.1 112 69.6
SGA_v2.0_scaffold60G20887 Striga asiatica HOM05D006868 ORTHO05D008444 1.1e-38 164.1 115 70.4
Ah.10g029580 Amaranthus hybridus HOM05D006868 ORTHO05D008444 1.5e-38 163.7 114 70.2
QL08p064908 Quercus lobata HOM05D006868 ORTHO05D008444 1.5e-38 163.7 116 70.7
Carub.0004s2298 Capsella rubella HOM05D006868 ORTHO05D008444 1.9e-38 163.3 112 68.8
Thecc.10G177500 Theobroma cacao HOM05D006868 ORTHO05D008444 1.9e-38 163.3 112 68.8
Glyma.02G218700 Glycine max HOM05D006868 ORTHO05D008444 2.5e-38 162.9 115 67.8
Hma1.2p1_0264F.1_g106070 Hydrangea macrophylla HOM05D006868 ORTHO05D008444 2.5e-38 162.9 113 69.0
Aa31LG3G1440 Aethionema arabicum HOM05D006868 ORTHO05D008444 3.3e-38 162.5 112 68.8
COL.COLO4_10032 Corchorus olitorius HOM05D006868 ORTHO05D008444 3.3e-38 162.5 115 67.0
Hund13444 Selenicereus undatus HOM05D006868 ORTHO05D008444 3.3e-38 162.5 111 70.3
AL4G38560 Arabidopsis lyrata HOM05D006868 ORTHO05D008444 5.6e-38 161.8 112 68.8
PGR142G3010 Punica granatum HOM05D006868 ORTHO05D008444 7.3e-38 161.4 112 67.0
Sabra13G0070500 Salix brachista HOM05D006868 ORTHO05D008444 7.3e-38 161.4 113 68.1
HPP92_019052 Vanilla planifolia HOM05D006868 ORTHO05D008444 7.3e-38 161.4 111 70.3
CDE04G1289 Ceratophyllum demersum HOM05D006868 ORTHO05D008444 9.6e-38 161.0 113 66.4
ECA232G1245 Erigeron canadensis HOM05D006868 ORTHO05D008444 1.6e-37 160.2 112 67.9
Nn2g10288 Nelumbo nucifera HOM05D006868 ORTHO05D008444 2.1e-37 159.8 111 69.4
Potri.013G090900 Populus trichocarpa HOM05D006868 ORTHO05D008444 2.1e-37 159.8 113 68.1
CAN.G24.1 Capsicum annuum HOM05D006868 ORTHO05D008444 2.8e-37 159.5 112 67.9
Eucgr.G03143 Eucalyptus grandis HOM05D006868 ORTHO05D008444 3.6e-37 159.1 111 67.6
AT2G40690 Arabidopsis thaliana HOM05D006868 ORTHO05D008444 6.2e-37 158.3 112 68.8
CARHR135790 Cardamine hirsuta HOM05D006868 ORTHO05D008444 6.2e-37 158.3 112 68.8
Haze_17362 Corylus avellana HOM05D006868 ORTHO05D008444 6.2e-37 158.3 111 68.5
DCAR_018040 Daucus carota HOM05D006868 ORTHO05D008444 6.2e-37 158.3 112 67.0
PGSC0003DMG400016644 Solanum tuberosum HOM05D006868 ORTHO05D008444 6.2e-37 158.3 112 67.9
Sp4g23010 Schrenkiella parvula HOM05D006868 ORTHO05D008444 8.1e-37 157.9 112 68.8
Aqoxy1G01258 Aquilegia oxysepala HOM05D006868 ORTHO05D008444 1.1e-36 157.5 115 66.1
Lalb_Chr17g0344691 Lupinus albus HOM05D006868 ORTHO05D008444 1.1e-36 157.5 112 68.8
BcaB06g29168 Brassica carinata HOM05D006868 ORTHO05D008444 1.4e-36 157.1 112 67.9
BcaC02g07329 Brassica carinata HOM05D006868 ORTHO05D008444 1.4e-36 157.1 112 67.9
A04p31090 Brassica napus HOM05D006868 ORTHO05D008444 1.4e-36 157.1 112 67.9
C04p68480 Brassica napus HOM05D006868 ORTHO05D008444 1.4e-36 157.1 112 67.9
BolC4t28348H Brassica oleracea HOM05D006868 ORTHO05D008444 1.4e-36 157.1 112 67.9
BraA04t18564Z Brassica rapa HOM05D006868 ORTHO05D008444 1.4e-36 157.1 112 67.9
Solyc06g048920.4 Solanum lycopersicum HOM05D006868 ORTHO05D008444 1.4e-36 157.1 112 67.9
Sopen06g015240 Solanum pennellii HOM05D006868 ORTHO05D008444 1.4e-36 157.1 112 67.9
Ca_05512_v3 Cicer arietinum L. HOM05D006868 ORTHO05D008444 1.8e-36 156.8 112 67.9
Ciclev10031473m.g Citrus clementina HOM05D006868 ORTHO05D008444 2.4e-36 156.4 112 63.4
CDE12G0946 Ceratophyllum demersum HOM05D006868 ORTHO05D008444 6.9e-36 154.8 113 63.7
Psat2g063200 Pisum sativum HOM05D006868 ORTHO05D008444 6.9e-36 154.8 112 67.0
Prupe.2G264600 Prunus persica HOM05D006868 ORTHO05D008444 6.9e-36 154.8 111 66.7
Sed0006945 Sechium edule HOM05D006868 ORTHO05D008444 9.0e-36 154.5 112 67.9
Actinidia13645 Actinidia chinensis HOM05D006868 ORTHO05D008444 1.2e-35 154.1 112 67.9
CSS0030170 Camellia sinensis var. sinensis HOM05D006868 ORTHO05D008444 1.2e-35 154.1 112 67.9
CsaV3_5G011040 Cucumis sativus L. HOM05D006868 ORTHO05D008444 1.2e-35 154.1 112 68.8
Medtr5g067640 Medicago truncatula HOM05D006868 ORTHO05D008444 1.2e-35 154.1 112 67.9
Rhsim03G0153100 Rhododendron simsii HOM05D006868 ORTHO05D008444 1.2e-35 154.1 113 66.4
Sc10g0003020 Simmondsia chinensis HOM05D006868 ORTHO05D008444 1.2e-35 154.1 111 68.5
FvH4_7g25990 Fragaria vesca HOM05D006868 ORTHO05D008444 1.5e-35 153.7 111 65.8
Lsat_1_v5_gn_9_60160 Lactuca sativa HOM05D006868 ORTHO05D008444 2.0e-35 153.3 112 64.3
ClCG07G005190 Citrullus lanatus HOM05D006868 ORTHO05D008444 2.6e-35 152.9 112 67.9
MELO3C020157.2 Cucumis melo HOM05D006868 ORTHO05D008444 3.4e-35 152.5 112 67.9
LjContig00408g0011230 Lotus japonicus HOM05D006868 ORTHO05D008444 3.4e-35 152.5 112 67.9
MD07G1234300 Malus domestica HOM05D006868 ORTHO05D008444 4.4e-35 152.1 111 64.9
ATR1127G100 Amborella trichopoda HOM05D006868 ORTHO05D008444 5.8e-35 151.8 117 65.0
arahy.Tifrunner.gnm1.ann1.4VC5Q7 Arachis hypogaea HOM05D006868 ORTHO05D008444 1.3e-34 150.6 139 56.8
HanXRQChr15g0493721 Helianthus annuus HOM05D006868 ORTHO05D008444 1.3e-34 150.6 115 62.6
RcHm_v2.0_Chr1g0372371 Rosa chinensis HOM05D006868 ORTHO05D008444 1.7e-34 150.2 114 64.9
TPR.G27028 Trifolium pratense HOM05D006868 ORTHO05D008444 3.8e-34 149.1 112 66.1
FAN03G1483 Fragaria x ananassa HOM05D006868 ORTHO05D008444 1.4e-33 147.1 119 62.2
FAN10G3251 Fragaria x ananassa HOM05D006868 ORTHO05D008444 1.4e-33 147.1 119 62.2
FAN06G3111 Fragaria x ananassa HOM05D006868 ORTHO05D008444 3.2e-33 146.0 119 61.3
FAN01G2299 Fragaria x ananassa HOM05D006868 ORTHO05D008444 9.3e-33 144.4 119 61.3
Mapoly0076s0092 Marchantia polymorpha HOM05D006868 ORTHO05D008444 1.3e-31 140.6 114 57.0
AagrBONN_evm.TU.Sc2ySwM_117.1137 Anthoceros agrestis HOM05D006868 ORTHO05D008444 6.6e-31 138.3 114 58.8
Pp3c2_32750 Physcomitrium patens HOM05D006868 ORTHO05D008444 1.1e-30 137.5 113 60.2
Pp3c1_10090 Physcomitrium patens HOM05D006868 ORTHO05D008444 2.5e-30 136.3 112 58.0
Nitab4.5_0000171g0160 Nicotiana tabacum HOM05D006868 ORTHO05D008444 9.9e-27 124.4 112 59.8
Peaxi162Scf00739g00427 Petunia axillaris HOM05D006868 ORTHO05D008444 9.9e-27 124.4 112 57.1
AUR62024939 Chenopodium quinoa HOM05D006868 ORTHO05D008444 1.3e-26 124.0 82 70.7
AUR62030605 Chenopodium quinoa HOM05D006868 ORTHO05D008444 4.9e-26 122.1 81 71.6
AUR62042095 Chenopodium quinoa HOM05D006868 ORTHO05D008444 7.1e-25 118.2 81 69.1
Lj1A968G51 Lonicera japonica HOM05D006868 ORTHO05D008444 1.2e-24 117.5 82 68.3
Actinidia31629 Actinidia chinensis HOM05D006868 ORTHO05D008444 1.6e-24 117.1 115 57.4
MCO03G330 Micromonas commoda HOM05D006868 ORTHO05D008444 9.6e-22 107.8 104 53.8
Cre12.g511150 Chlamydomonas reinhardtii HOM05D006868 ORTHO05D008444 2.6e-19 99.8 103 46.6
PRCOL_00000183 Prasinoderma coloniale HOM05D006868 ORTHO05D008444 2.9e-18 96.3 107 49.5
SEGI_34201 Sequoiadendron giganteum HOM05D006868 ORTHO05D008444 3.8e-18 95.9 78 60.3


User provided reference genes

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