Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0722100 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293739 5.2e-215 750.7 370 100.0
Os06g0720400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294711 5.6e-185 651.0 317 100.0
Os06g0722450 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293796 5.6e-185 651.0 317 100.0
Os06g0722700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297080 5.6e-185 651.0 317 100.0
Os06g0723900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301154 5.6e-185 651.0 317 100.0
Os06g0719600 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295390 2.3e-183 645.6 317 99.4
Os06g0720700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D299104 1.4e-180 636.3 317 97.8
Os10g0458300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297170 4.0e-66 256.1 333 50.2
Os06g0489900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297815 5.8e-65 252.3 283 50.9
Os07g0258000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301337 1.1e-52 211.5 319 44.5
Os01g0776800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D030322 1.4e-50 204.5 298 46.3
Os05g0548700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295144 2.4e-50 203.8 223 52.0
SGA_v2.0_scaffold112G31661 Striga asiatica HOM05D009542 ORTHO05D030322 4.5e-41 172.9 306 40.2
SGA_v2.0_scaffold555G52903 Striga asiatica HOM05D009542 ORTHO05D030322 4.5e-41 172.9 306 40.2
Os02g0113300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301167 8.1e-35 152.1 294 38.1
Os02g0113800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301000 8.1e-35 152.1 296 38.5
SGA_v2.0_scaffold5524G54649 Striga asiatica HOM05D009542 ORTHO05D030322 9.3e-31 138.7 150 47.3
Os02g0113900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294256 2.3e-21 107.5 117 53.0
Os05g0332250 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D296551 7.4e-20 102.4 168 44.6
Os02g0492500 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D298169 8.2e-19 99.0 288 32.6
Os02g0793400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D298023 3.1e-18 97.1 168 43.5
Os07g0633300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D296036 1.0e-16 92.0 256 34.0
Os09g0567000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297207 2.1e-14 84.3 268 31.3
Os03g0173700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301692 7.4e-12 75.9 284 25.0
Os12g0540000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293887 2.8e-11 73.9 84 47.6
Os09g0558600 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294796 1.2e-09 68.6 199 30.2
SGA_v2.0_scaffold43G16234 Striga asiatica HOM05D009542 ORTHO05D402718 3.4e-09 67.0 116 44.0
Os04g0380500 Oryza sativa ssp. japonica HOM05D032120 ORTHO05D295416 8.5e-08 62.4 208 29.3
Os11g0557400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D300655 1.4e-07 61.6 90 38.9
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 2.1e-06 57.8 147 33.3


User provided reference genes

Program Settings