Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0719600 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295390 2.5e-289 998.0 489 100.0
Os06g0720400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294711 2.3e-287 991.5 489 99.4
Os06g0722450 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293796 2.3e-287 991.5 489 99.4
Os06g0722700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297080 2.3e-287 991.5 489 99.4
Os06g0723900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301154 2.3e-287 991.5 489 99.4
Os06g0720700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D299104 1.5e-283 978.8 489 98.2
Os06g0722100 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293739 4.1e-183 645.2 317 99.4
Os10g0458300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297170 3.2e-95 353.2 512 47.1
Os06g0489900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297815 1.2e-94 351.3 473 46.5
Os01g0776800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D030322 2.9e-64 250.4 468 39.5
SGA_v2.0_scaffold112G31661 Striga asiatica HOM05D009542 ORTHO05D030322 3.3e-60 236.9 445 38.9
SGA_v2.0_scaffold555G52903 Striga asiatica HOM05D009542 ORTHO05D030322 3.3e-60 236.9 445 38.9
Os07g0258000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301337 1.8e-53 214.5 329 44.1
Os05g0548700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295144 6.9e-50 202.6 223 52.0
SGA_v2.0_scaffold5524G54649 Striga asiatica HOM05D009542 ORTHO05D030322 1.7e-48 198.0 283 42.0
Os02g0113800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301000 3.2e-47 193.7 498 34.1
Os02g0113300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301167 4.7e-46 189.9 485 34.0
Os02g0113900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294256 1.5e-31 141.7 312 36.2
Os02g0492500 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D298169 1.5e-28 131.7 486 29.8
Os02g0793400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D298023 9.5e-23 112.5 398 31.2
Os05g0332250 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D296551 1.5e-20 105.1 322 32.6
Os11g0557400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D300655 5.7e-20 103.2 270 29.6
Os09g0558600 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294796 2.4e-18 97.8 431 25.1
Os12g0540000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293887 1.6e-17 95.1 323 28.2
Os07g0633300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D296036 2.7e-17 94.4 455 27.3
Os09g0567000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297207 4.3e-15 87.0 453 25.8
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 3.0e-13 80.9 385 24.7
Os03g0173700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301692 1.7e-11 75.1 353 23.5
SGA_v2.0_scaffold43G16234 Striga asiatica HOM05D009542 ORTHO05D402718 4.6e-09 67.0 116 44.0
Os04g0380500 Oryza sativa ssp. japonica HOM05D032120 ORTHO05D295416 1.1e-07 62.4 208 29.3


User provided reference genes

Program Settings