Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 5.9e-61 237.3 114 100.0
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 1.8e-49 199.1 103 90.3
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 6.8e-49 197.2 111 80.2
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 8.9e-49 196.8 113 79.6
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 1.2e-48 196.4 113 79.6
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 5.8e-48 194.1 110 80.0
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 9.8e-48 193.4 111 81.1
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 1.7e-47 192.6 113 77.9
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 2.9e-47 191.8 110 79.1
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 2.9e-47 191.8 110 80.9
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 3.7e-47 191.4 112 77.7
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 6.4e-47 190.7 113 76.1
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 6.4e-47 190.7 113 77.9
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 8.3e-47 190.3 110 79.1
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 1.1e-46 189.9 111 77.5
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 1.1e-46 189.9 110 77.3
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 1.4e-46 189.5 113 74.3
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 1.4e-46 189.5 112 78.6
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 1.9e-46 189.1 113 74.3
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 1.9e-46 189.1 113 74.3
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 1.9e-46 189.1 112 76.8
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 3.2e-46 188.3 111 78.4
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.2e-46 188.3 112 76.8
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 3.2e-46 188.3 113 76.1
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 4.1e-46 188.0 112 76.8
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 5.4e-46 187.6 112 76.8
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 5.4e-46 187.6 112 77.7
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 5.4e-46 187.6 110 76.4
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 7.0e-46 187.2 113 74.3
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 7.0e-46 187.2 112 77.7
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 9.2e-46 186.8 111 78.4
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 9.2e-46 186.8 112 75.0
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 9.2e-46 186.8 113 73.5
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 1.2e-45 186.4 110 76.4
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.6e-45 186.0 112 76.8
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 1.6e-45 186.0 112 76.8
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 1.6e-45 186.0 111 75.7
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 1.6e-45 186.0 110 75.5
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 2.0e-45 185.7 113 74.3
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.7e-45 185.3 111 77.5
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 2.7e-45 185.3 111 74.8
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 3.5e-45 184.9 113 74.3
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 4.6e-45 184.5 112 75.0
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 4.6e-45 184.5 113 72.6
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 6.0e-45 184.1 109 76.1
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 6.0e-45 184.1 107 77.6
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 6.0e-45 184.1 107 77.6
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 7.8e-45 183.7 113 73.5
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 7.8e-45 183.7 113 74.3
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 1.0e-44 183.3 112 72.3
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 1.0e-44 183.3 111 74.8
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 1.3e-44 183.0 111 74.8
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 1.3e-44 183.0 111 74.8
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 1.3e-44 183.0 111 74.8
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 1.3e-44 183.0 111 74.8
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 1.7e-44 182.6 110 75.5
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 2.3e-44 182.2 111 74.8
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 2.3e-44 182.2 111 74.8
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 2.3e-44 182.2 111 74.8
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 2.3e-44 182.2 111 74.8
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 2.3e-44 182.2 111 74.8
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 2.3e-44 182.2 111 74.8
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 2.3e-44 182.2 111 74.8
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 2.3e-44 182.2 111 75.7
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 3.0e-44 181.8 111 74.8
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 3.0e-44 181.8 113 71.7
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 3.0e-44 181.8 113 71.7
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 3.9e-44 181.4 111 73.0
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 5.0e-44 181.0 113 71.7
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 5.0e-44 181.0 134 63.4
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 5.0e-44 181.0 110 74.5
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 5.0e-44 181.0 112 73.2
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 8.6e-44 180.3 111 73.9
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 8.6e-44 180.3 111 73.9
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.1e-43 179.9 111 73.0
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.1e-43 179.9 111 73.0
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.1e-43 179.9 109 75.2
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 1.5e-43 179.5 110 75.5
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 1.5e-43 179.5 111 72.1
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 1.9e-43 179.1 111 72.1
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 2.5e-43 178.7 111 73.9
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 3.3e-43 178.3 111 73.9
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 3.3e-43 178.3 111 73.0
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 3.3e-43 178.3 111 72.1
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 3.3e-43 178.3 111 72.1
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 9.5e-43 176.8 112 71.4
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 9.5e-43 176.8 111 72.1
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 9.5e-43 176.8 111 72.1
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 1.2e-42 176.4 110 72.7
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 1.2e-42 176.4 110 73.6
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 1.2e-42 176.4 110 72.7
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 1.6e-42 176.0 111 73.0
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 1.6e-42 176.0 114 71.9
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.6e-42 176.0 111 70.3
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.6e-42 176.0 111 70.3
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 1.6e-42 176.0 110 72.7
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 2.1e-42 175.6 110 71.8
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 4.7e-42 174.5 111 69.4
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 6.2e-42 174.1 109 71.6
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 8.1e-42 173.7 109 75.2
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 2.3e-41 172.2 112 71.4
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 5.2e-41 171.0 112 70.5
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 1.7e-39 166.0 111 68.5
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 4.9e-39 164.5 146 56.8
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 8.3e-39 163.7 106 70.8
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 2.4e-38 162.2 177 48.0
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 9.2e-38 160.2 96 76.0
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 9.2e-38 160.2 102 71.6
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.6e-37 159.5 103 68.9
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.6e-37 159.5 102 71.6
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 2.1e-37 159.1 111 67.6
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 3.5e-37 158.3 103 68.0
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 7.8e-37 157.1 99 73.7
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 1.0e-36 156.8 111 60.4
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 2.3e-36 155.6 102 67.6
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 3.0e-36 155.2 119 66.4
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 6.6e-36 154.1 106 66.0
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 4.3e-35 151.4 100 67.0
CDE04G1205 Ceratophyllum demersum HOM05D005368 ORTHO05D006417 1.2e-34 149.8 87 80.5
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 1.6e-34 149.4 101 69.3
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.4e-33 146.4 109 66.1
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 1.5e-32 142.9 110 59.1
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 2.9e-31 138.7 111 53.2
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 3.8e-31 138.3 113 60.2
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 5.4e-30 134.4 111 55.0
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 3.3e-27 125.2 111 50.5
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 1.1e-25 120.2 111 55.0
PGSC0003DMG400005571 Solanum tuberosum HOM05D005368 ORTHO05D006417 2.4e-25 119.0 80 70.0
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 8.9e-25 117.1 103 51.5
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 6.4e-23 110.9 103 50.5
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 7.1e-22 107.5 103 50.5
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 1.1e-19 100.1 54 79.6
MCO15G169 Micromonas commoda HOM05D005368 ORTHO05D006417 3.6e-18 95.1 96 45.8
BolC3t20846H Brassica oleracea HOM05D005368 ORTHO05D006417 6.2e-18 94.4 54 81.5
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 6.2e-18 94.4 57 68.4
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 1.1e-17 93.6 54 72.2
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 6.9e-17 90.9 54 72.2
HanXRQChr17g0544121 Helianthus annuus HOM05D005368 ORTHO05D006417 1.5e-16 89.7 56 76.8
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 2.6e-16 89.0 60 65.0
Gohir.A13G090800 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.4e-16 88.6 82 54.9
Migut.B00174 Erythranthe guttata HOM05D005368 ORTHO05D006417 5.8e-16 87.8 53 77.4
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 6.0e-13 77.8 113 38.9
BcaNung04613 Brassica carinata HOM05D005368 ORTHO05D006417 1.0e-12 77.0 55 63.6
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 3.0e-12 75.5 149 34.9
BcaNung02377 Brassica carinata HOM05D005368 ORTHO05D006417 1.1e-11 73.6 47 68.1
MD05G1026100 Malus domestica HOM05D005333 ORTHO05D005776 3.6e-10 68.6 54 63.0
Cre11.g467668 Chlamydomonas reinhardtii HOM05D005368 ORTHO05D006417 9.0e-09 63.9 99 34.3


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