Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0711100 Oryza sativa ssp. japonica HOM05D062852 ORTHO05D002272 7.1e-138 494.2 301 100.0
Zm00001eb227700 Zea mays HOM05D062852 ORTHO05D002272 7.8e-44 181.8 262 45.0
HPP92_012930 Vanilla planifolia HOM05D027732 ORTHO05D002272 7.6e-15 85.5 136 38.2
Gohir.D12G035500 Gossypium hirsutum HOM05D002972 ORTHO05D002272 1.1e-13 81.6 163 32.5
Gorai.008G036800 Gossypium raimondii HOM05D002972 ORTHO05D002272 1.1e-13 81.6 163 32.5
Ciclev10028228m.g Citrus clementina HOM05D002972 ORTHO05D002272 7.1e-13 79.0 156 35.3
COL.COLO4_17354 Corchorus olitorius HOM05D002972 ORTHO05D002272 6.0e-12 75.9 142 33.1
Gohir.A12G036900 Gossypium hirsutum HOM05D002972 ORTHO05D002272 1.8e-11 74.3 163 31.3
HPP92_025931 Vanilla planifolia HOM05D027732 ORTHO05D002272 3.9e-11 73.2 168 30.4
Manes.04G072100 Manihot esculenta HOM05D002972 ORTHO05D002272 7.4e-10 68.9 90 42.2
PGR142G3299 Punica granatum HOM05D002972 ORTHO05D002272 8.2e-09 65.5 81 39.5
Peaxi162Scf00042g00232 Petunia axillaris HOM05D005026 ORTHO05D005981 1.8e-08 64.3 90 36.7
Duzib248G0175 Durio zibethinus HOM05D002972 ORTHO05D002272 1.2e-07 61.6 79 39.2
HPP92_021087 Vanilla planifolia HOM05D044419 ORTHO05D429221 2.6e-07 60.5 181 27.1
Eucgr.I01431 Eucalyptus grandis HOM05D002972 ORTHO05D002272 5.8e-07 59.3 74 37.8
Lj5g0016622 Lotus japonicus HOM05D002972 ORTHO05D002272 1.3e-06 58.2 78 39.7
Ca_13011_v3 Cicer arietinum L. HOM05D002972 ORTHO05D002272 2.2e-06 57.4 77 39.0
Glyma.20G107600 Glycine max HOM05D002972 ORTHO05D002272 3.8e-06 56.6 79 36.7
Psat5g002240 Pisum sativum HOM05D002972 ORTHO05D002272 6.5e-06 55.8 93 35.5
Medtr1g112660 Medicago truncatula HOM05D002972 ORTHO05D002272 8.4e-06 55.5 77 37.7


User provided reference genes

Program Settings