Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0662225 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 4.2e-66 254.6 133 100.0
Os06g0655200 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.3e-46 189.9 117 82.1
Os04g0329200 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.0e-44 182.6 117 81.2
Os04g0317500 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.3e-43 179.9 117 81.2
Os04g0329300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 6.5e-43 177.6 117 78.6
Os06g0662300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 6.5e-43 177.6 119 75.6
Os04g0317400 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 8.5e-43 177.2 117 77.8
Os04g0317800 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 7.2e-42 174.1 117 78.6
Os06g0662500 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.6e-41 172.9 117 76.9
Os06g0662850 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.6e-41 172.9 117 76.9
Os06g0663300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 3.6e-41 171.8 117 76.1
Os06g0662900 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.8e-40 169.5 117 74.4
Os06g0662600 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.3e-40 169.1 117 75.2
Os04g0328900 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.2e-38 162.5 126 68.3
Os06g0662700 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 6.8e-32 141.0 98 72.4
Zm00001eb163820 Zea mays HOM05D009528 ORTHO05D013902 5.9e-28 127.9 120 61.7
Zm00001eb175340 Zea mays HOM05D009528 ORTHO05D445156 4.4e-23 111.7 120 55.0
Zm00001eb292210 Zea mays HOM05D009528 ORTHO05D443224 1.7e-22 109.8 120 54.2
Zm00001eb175290 Zea mays HOM05D009528 ORTHO05D444927 1.1e-21 107.1 120 53.3
Zm00001eb175370 Zea mays HOM05D009528 ORTHO05D443444 1.1e-21 107.1 120 53.3
Zm00001eb292170 Zea mays HOM05D009528 ORTHO05D443529 2.4e-21 105.9 120 52.5
Zm00001eb292180 Zea mays HOM05D009528 ORTHO05D443816 3.1e-21 105.5 120 52.5
Zm00001eb375630 Zea mays HOM05D009528 ORTHO05D443277 4.1e-21 105.1 120 52.5
Zm00001eb175310 Zea mays HOM05D009528 ORTHO05D446762 5.4e-21 104.8 120 53.3
Zm00001eb292190 Zea mays HOM05D009528 ORTHO05D441949 9.1e-21 104.0 120 51.7
Zm00001eb175360 Zea mays HOM05D009528 ORTHO05D443856 4.5e-20 101.7 112 56.2
Zm00001eb175320 Zea mays HOM05D009528 ORTHO05D446523 1.5e-18 96.7 117 49.6
Zm00001eb175330 Zea mays HOM05D009528 ORTHO05D444019 2.8e-17 92.4 94 53.2
Os03g0106500 Oryza sativa ssp. japonica HOM05D000383 ORTHO05D000730 4.1e-13 78.6 101 40.6
Os03g0106900 Oryza sativa ssp. japonica HOM05D000383 ORTHO05D000730 4.1e-13 78.6 101 40.6
Os03g0106700 Oryza sativa ssp. japonica HOM05D000383 ORTHO05D000730 1.0e-11 73.9 121 36.4
Os03g0106800 Oryza sativa ssp. japonica HOM05D000383 ORTHO05D000730 1.2e-09 67.0 99 36.4
RcHm_v2.0_Chr1g0348851 Rosa chinensis HOM05D000383 ORTHO05D000730 7.5e-07 57.8 95 31.6
Zm00001eb023430 Zea mays HOM05D000383 ORTHO05D000730 1.3e-06 57.0 96 29.2
PSO017G6946 Papaver somniferum HOM05D000383 ORTHO05D000730 1.7e-06 56.6 100 30.0
Hund17050 Selenicereus undatus HOM05D000383 ORTHO05D000730 1.7e-06 56.6 91 30.8
PGR004G1361 Punica granatum HOM05D000383 ORTHO05D000730 2.2e-06 56.2 104 31.7
VMungo0720G1432 Vigna mungo HOM05D000383 ORTHO05D000730 6.4e-06 54.7 100 31.0
Zm00001eb306350 Zea mays HOM05D000383 ORTHO05D000730 8.3e-06 54.3 93 31.2
Zm00001eb391360 Zea mays HOM05D000383 ORTHO05D000730 8.3e-06 54.3 97 29.9


User provided reference genes

Program Settings