Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0659200 Oryza sativa ssp. japonica HOM05D003614 ORTHO05D004156 3.5e-94 348.2 168 100.0
Zm00001eb274760 Zea mays HOM05D003614 ORTHO05D004156 3.6e-83 311.6 168 86.9
Dinv00797 Davidia involucrata HOM05D003614 ORTHO05D004156 1.5e-68 263.1 168 73.2
TAR580G0003 Trochodendron aralioides HOM05D003614 ORTHO05D004156 1.5e-68 263.1 167 73.1
Atru.chr1.1276 Acer truncatum HOM05D003614 ORTHO05D004156 3.7e-67 258.5 168 68.5
MD12G1089700 Malus domestica HOM05D003614 ORTHO05D004156 3.7e-67 258.5 168 69.0
CSS0031196 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 1.8e-66 256.1 168 70.8
TWI74G0330 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 3.1e-66 255.4 167 68.3
Haze_19741 Corylus avellana HOM05D003614 ORTHO05D004156 6.9e-66 254.2 168 69.6
Prupe.7G047200 Prunus persica HOM05D003614 ORTHO05D004156 1.5e-65 253.1 165 69.1
PGR142G0250 Punica granatum HOM05D003614 ORTHO05D004156 3.4e-65 251.9 169 67.5
Rhsim03G0033800 Rhododendron simsii HOM05D003614 ORTHO05D004156 4.5e-65 251.5 168 68.5
DCAR_016966 Daucus carota HOM05D003614 ORTHO05D004156 7.6e-65 250.8 167 68.9
TPR.G13793 Trifolium pratense HOM05D003614 ORTHO05D004156 1.0e-64 250.4 168 69.0
MBI14_g19444_MAGBIO Magnolia biondii HOM05D003614 ORTHO05D004156 1.3e-64 250.0 167 70.1
Cfa016733 Carpinus fangiana HOM05D003614 ORTHO05D004156 1.7e-64 249.6 168 68.5
COL.COLO4_33914 Corchorus olitorius HOM05D003614 ORTHO05D004156 1.7e-64 249.6 168 67.3
Sabra06G0029800 Salix brachista HOM05D003614 ORTHO05D004156 3.8e-64 248.4 168 68.5
CiPaw.09G043900 Carya illinoinensis HOM05D003614 ORTHO05D004156 5.0e-64 248.1 168 68.5
Ca_02700_v3 Cicer arietinum L. HOM05D003614 ORTHO05D004156 6.5e-64 247.7 168 66.7
QL07p006290 Quercus lobata HOM05D003614 ORTHO05D004156 6.5e-64 247.7 167 67.1
Potri.006G043650 Populus trichocarpa HOM05D003614 ORTHO05D004156 8.4e-64 247.3 168 67.9
Glyma.16G222000 Glycine max HOM05D003614 ORTHO05D004156 1.1e-63 246.9 167 67.7
PSO017G5444 Papaver somniferum HOM05D003614 ORTHO05D004156 1.1e-63 246.9 166 69.9
Psat6g087880 Pisum sativum HOM05D003614 ORTHO05D004156 1.1e-63 246.9 168 69.0
Manes.08G056200 Manihot esculenta HOM05D003614 ORTHO05D004156 1.4e-63 246.5 168 67.9
QL07p006066 Quercus lobata HOM05D003614 ORTHO05D004156 1.9e-63 246.1 167 67.7
RcHm_v2.0_Chr2g0124831 Rosa chinensis HOM05D003614 ORTHO05D004156 2.5e-63 245.7 168 66.1
QL07p005711 Quercus lobata HOM05D003614 ORTHO05D004156 3.2e-63 245.4 167 66.5
Glyma.16G116350 Glycine max HOM05D003614 ORTHO05D004156 5.5e-63 244.6 167 67.1
CANSAT54G1064 Cannabis sativa HOM05D003614 ORTHO05D004156 1.2e-62 243.4 168 63.7
Lj1P1115T19 Lonicera japonica HOM05D003614 ORTHO05D004156 1.2e-62 243.4 167 66.5
QL07p006078 Quercus lobata HOM05D003614 ORTHO05D004156 1.2e-62 243.4 167 67.7
FAN02G3060 Fragaria x ananassa HOM05D003614 ORTHO05D004156 2.1e-62 242.7 167 66.5
FAN14G1287 Fragaria x ananassa HOM05D003614 ORTHO05D004156 2.7e-62 242.3 167 66.5
FvH4_6g25070 Fragaria vesca HOM05D003614 ORTHO05D004156 3.5e-62 241.9 167 66.5
Aqoxy5G04186 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 6.1e-62 241.1 166 66.9
ClCG10G005410 Citrullus lanatus HOM05D003614 ORTHO05D004156 7.9e-62 240.7 168 62.5
Oeu008197.1 Olea europaea HOM05D003614 ORTHO05D004156 1.8e-61 239.6 167 62.9
AL6G13670 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 3.0e-61 238.8 168 62.5
FAN09G2704 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.9e-61 238.4 167 65.3
Sed0022963 Sechium edule HOM05D003614 ORTHO05D004156 5.1e-61 238.0 168 61.9
Sc13g0001410 Simmondsia chinensis HOM05D003614 ORTHO05D004156 6.7e-61 237.7 168 64.9
arahy.Tifrunner.gnm1.ann1.MR16VB Arachis hypogaea HOM05D003614 ORTHO05D004156 8.7e-61 237.3 167 64.7
arahy.Tifrunner.gnm1.ann1.P66LNP Arachis hypogaea HOM05D003614 ORTHO05D004156 8.7e-61 237.3 167 64.7
THA.LOC104823214 Tarenaya hassleriana HOM05D003614 ORTHO05D004156 8.7e-61 237.3 168 62.5
CsaV3_3G005150 Cucumis sativus L. HOM05D003614 ORTHO05D004156 1.1e-60 236.9 168 61.3
Aa31LG1G21260 Aethionema arabicum HOM05D003614 ORTHO05D004156 1.5e-60 236.5 166 62.0
Nitab4.5_0010525g0010 Nicotiana tabacum HOM05D003614 ORTHO05D004156 2.5e-60 235.7 167 65.3
C09p72780 Brassica napus HOM05D003614 ORTHO05D004156 3.3e-60 235.3 168 61.3
BolC9t60016H Brassica oleracea HOM05D003614 ORTHO05D004156 3.3e-60 235.3 168 61.3
ATR0580G046 Amborella trichopoda HOM05D003614 ORTHO05D004156 7.4e-60 234.2 160 68.8
Sp6g38700 Schrenkiella parvula HOM05D003614 ORTHO05D004156 7.4e-60 234.2 168 61.3
EL10Ac3g07183 Beta vulgaris HOM05D003614 ORTHO05D004156 9.7e-60 233.8 168 61.9
BcaC06g32109 Brassica carinata HOM05D003614 ORTHO05D004156 9.7e-60 233.8 168 60.7
CAN.G1237.32 Capsicum annuum HOM05D003614 ORTHO05D004156 1.3e-59 233.4 167 62.9
MELO3C025378.2 Cucumis melo HOM05D003614 ORTHO05D004156 1.6e-59 233.0 168 60.1
Actinidia39178 Actinidia chinensis HOM05D003614 ORTHO05D004156 2.2e-59 232.6 157 68.8
BraA10t45251Z Brassica rapa HOM05D003614 ORTHO05D004156 3.7e-59 231.9 168 60.7
Nitab4.5_0005031g0070 Nicotiana tabacum HOM05D003614 ORTHO05D004156 3.7e-59 231.9 167 62.9
A10p32060 Brassica napus HOM05D003614 ORTHO05D004156 4.8e-59 231.5 168 60.1
Dinv04144 Davidia involucrata HOM05D003614 ORTHO05D004156 4.8e-59 231.5 146 73.3
Thhalv10012522m.g Eutrema salsugineum HOM05D003614 ORTHO05D004156 4.8e-59 231.5 166 60.8
VMungo0331G0942 Vigna mungo HOM05D003614 ORTHO05D004156 8.2e-59 230.7 168 66.1
vmacro23496 Vaccinium macrocarpon HOM05D003614 ORTHO05D004156 1.4e-58 229.9 157 67.5
GSVIVG01033568001 Vitis vinifera HOM05D003614 ORTHO05D004156 2.4e-58 229.2 150 68.7
PGSC0003DMG400022532 Solanum tuberosum HOM05D003614 ORTHO05D004156 4.1e-58 228.4 167 61.1
Carub.0006s0300 Capsella rubella HOM05D003614 ORTHO05D004156 5.3e-58 228.0 168 59.5
AUR62026155 Chenopodium quinoa HOM05D003614 ORTHO05D004156 1.2e-57 226.9 168 61.3
unitig_748.g7231 Utricularia gibba HOM05D003614 ORTHO05D004156 3.4e-57 225.3 164 62.2
Ah.13g076640 Amaranthus hybridus HOM05D003614 ORTHO05D004156 7.7e-57 224.2 169 62.7
Nn1g04314 Nelumbo nucifera HOM05D003614 ORTHO05D004156 2.2e-56 222.6 145 72.4
AUR62037179 Chenopodium quinoa HOM05D003614 ORTHO05D004156 8.5e-56 220.7 168 61.3
Duzib128G0580 Durio zibethinus HOM05D003614 ORTHO05D004156 2.5e-55 219.2 150 64.7
Solyc03g033520.2 Solanum lycopersicum HOM05D003614 ORTHO05D004156 3.2e-55 218.8 167 60.5
HanXRQChr13g0395821 Helianthus annuus HOM05D003614 ORTHO05D004156 1.2e-54 216.9 166 60.8
ECA248G3258 Erigeron canadensis HOM05D003614 ORTHO05D004156 2.7e-54 215.7 166 59.0
Rhsim10G0199100 Rhododendron simsii HOM05D003614 ORTHO05D004156 9.7e-52 207.2 136 68.4
Sopen03g006270 Solanum pennellii HOM05D003614 ORTHO05D004156 8.2e-51 204.1 167 57.5
SEGI_09252 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 9.1e-50 200.7 159 58.5
QL03p003469 Quercus lobata HOM05D003614 ORTHO05D004156 1.1e-47 193.7 139 61.9
QL03p003473 Quercus lobata HOM05D003614 ORTHO05D004156 1.1e-47 193.7 139 61.9
VMungo0720G1667 Vigna mungo HOM05D003614 ORTHO05D004156 2.5e-47 192.6 134 66.4
SHI03570 Sapria himalayana HOM05D003614 ORTHO05D004156 4.2e-47 191.8 149 57.7
Lsat_1_v5_gn_5_158800 Lactuca sativa HOM05D003614 ORTHO05D004156 7.9e-46 187.6 158 57.6
SGA_v2.0_scaffold94G28503 Striga asiatica HOM05D003614 ORTHO05D004156 1.4e-45 186.8 169 51.5
Peaxi162Scf00130g01210 Petunia axillaris HOM05D003614 ORTHO05D004156 8.2e-43 177.6 152 57.9
Cpa.g.sc161.31 Carica papaya HOM05D003614 ORTHO05D004156 9.4e-39 164.1 122 60.7
QL11p043104 Quercus lobata HOM05D003614 ORTHO05D004156 7.5e-28 127.9 85 69.4
Lalb_Chr02g0142191 Lupinus albus HOM05D003614 ORTHO05D004156 6.3e-27 124.8 80 71.2
QL11p043133 Quercus lobata HOM05D003614 ORTHO05D004156 5.0e-16 88.6 79 58.2
Prupe.3G158600 Prunus persica HOM05D003614 ORTHO05D004156 4.7e-14 82.0 74 54.1
Pp3c13_4900 Physcomitrium patens HOM05D001560 ORTHO05D003613 8.9e-13 77.8 164 29.9
QL03p003747 Quercus lobata HOM05D003614 ORTHO05D004156 1.3e-08 63.9 53 50.9
Phvul.003G215300 Phaseolus vulgaris HOM05D003614 ORTHO05D004156 2.3e-08 63.2 171 26.3
SEGI_08289 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 2.3e-08 63.2 161 26.7
PSO017G1060 Papaver somniferum HOM05D003614 ORTHO05D004156 7.3e-07 58.2 164 26.8
PSO017G0346 Papaver somniferum HOM05D003614 ORTHO05D004156 1.2e-06 57.4 164 26.8
Actinidia06613 Actinidia chinensis HOM05D003614 ORTHO05D004156 2.8e-06 56.2 161 25.5


User provided reference genes

Program Settings