Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0644800 Oryza sativa ssp. japonica HOM05D005541 ORTHO05D006875 6.5e-91 337.4 175 100.0
Zm00001eb028460 Zea mays HOM05D005541 ORTHO05D006875 3.1e-61 238.8 151 74.2
MD15G1162200 Malus domestica HOM05D005541 ORTHO05D006875 6.8e-40 167.9 146 52.7
Zm00001eb136970 Zea mays HOM05D005541 ORTHO05D006875 1.3e-38 163.7 84 85.7
MD02G1018200 Malus domestica HOM05D005541 ORTHO05D006875 2.9e-38 162.5 146 50.7
Dinv36447 Davidia involucrata HOM05D005541 ORTHO05D006875 3.7e-38 162.2 128 57.8
Aqoxy7G03592 Aquilegia oxysepala HOM05D005541 ORTHO05D006875 4.9e-38 161.8 130 56.2
TAR100G0002 Trochodendron aralioides HOM05D005541 ORTHO05D006875 8.3e-38 161.0 127 59.1
TAR170G0003 Trochodendron aralioides HOM05D005541 ORTHO05D006875 8.3e-38 161.0 127 59.1
Gohir.A08G090600 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.1e-37 160.6 128 57.8
Gorai.004G109500 Gossypium raimondii HOM05D005541 ORTHO05D006875 1.8e-37 159.8 128 57.8
Prupe.7G257600 Prunus persica HOM05D005541 ORTHO05D006875 1.8e-37 159.8 160 50.6
Sed0021107 Sechium edule HOM05D005541 ORTHO05D006875 3.2e-37 159.1 130 58.5
Thecc.09G137600 Theobroma cacao HOM05D005541 ORTHO05D006875 4.1e-37 158.7 128 58.6
Lsat_1_v5_gn_7_46800 Lactuca sativa HOM05D005541 ORTHO05D006875 5.4e-37 158.3 127 56.7
SGA_v2.0_scaffold45G17077 Striga asiatica HOM05D005541 ORTHO05D006875 1.6e-36 156.8 128 54.7
Ciclev10009016m.g Citrus clementina HOM05D005541 ORTHO05D006875 2.7e-36 156.0 130 53.8
DCAR_009345 Daucus carota HOM05D005541 ORTHO05D006875 4.6e-36 155.2 129 55.8
QL02p090804 Quercus lobata HOM05D005541 ORTHO05D006875 4.6e-36 155.2 128 56.2
Cfa002261 Carpinus fangiana HOM05D005541 ORTHO05D006875 5.9e-36 154.8 127 55.1
PSO478G5201 Papaver somniferum HOM05D005541 ORTHO05D006875 7.8e-36 154.5 127 55.9
TWI63G0008 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 7.8e-36 154.5 128 55.5
Actinidia26358 Actinidia chinensis HOM05D005541 ORTHO05D006875 1.0e-35 154.1 130 53.8
ClCG06G011880 Citrullus lanatus HOM05D005541 ORTHO05D006875 1.0e-35 154.1 130 56.2
Sed0001591 Sechium edule HOM05D005541 ORTHO05D006875 1.0e-35 154.1 131 55.7
HPP92_020539 Vanilla planifolia HOM05D005541 ORTHO05D006875 1.0e-35 154.1 129 54.3
TWI63G1467 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 1.7e-35 153.3 128 54.7
MELO3C010277.2 Cucumis melo HOM05D005541 ORTHO05D006875 2.3e-35 152.9 131 56.5
RcHm_v2.0_Chr2g0087061 Rosa chinensis HOM05D005541 ORTHO05D006875 2.3e-35 152.9 119 58.8
GSVIVG01012859001 Vitis vinifera HOM05D005541 ORTHO05D006875 2.3e-35 152.9 128 55.5
CiPaw.04G177400 Carya illinoinensis HOM05D005541 ORTHO05D006875 2.9e-35 152.5 131 55.0
Duzib187G1717 Durio zibethinus HOM05D005541 ORTHO05D006875 2.9e-35 152.5 128 56.2
HanXRQChr03g0063361 Helianthus annuus HOM05D005541 ORTHO05D006875 2.9e-35 152.5 127 55.9
Duzib168G0734 Durio zibethinus HOM05D005541 ORTHO05D006875 5.0e-35 151.8 128 57.0
Cc06_g07640 Coffea canephora HOM05D005541 ORTHO05D006875 6.6e-35 151.4 128 53.9
FvH4_1g02000 Fragaria vesca HOM05D005541 ORTHO05D006875 6.6e-35 151.4 119 57.1
FAN19G0623 Fragaria x ananassa HOM05D005541 ORTHO05D006875 6.6e-35 151.4 119 57.1
TWI32G1342 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 6.6e-35 151.4 128 53.9
vmacro06115 Vaccinium macrocarpon HOM05D005541 ORTHO05D006875 6.6e-35 151.4 128 53.1
CsaV3_1G028340 Cucumis sativus L. HOM05D005541 ORTHO05D006875 8.6e-35 151.0 131 55.7
Migut.J01236 Erythranthe guttata HOM05D005541 ORTHO05D006875 8.6e-35 151.0 128 53.1
PGR142G4414 Punica granatum HOM05D005541 ORTHO05D006875 1.9e-34 149.8 128 53.9
Atru.chr7.2014 Acer truncatum HOM05D005541 ORTHO05D006875 2.5e-34 149.4 128 52.3
PSO017G3833 Papaver somniferum HOM05D005541 ORTHO05D006875 2.5e-34 149.4 127 54.3
Rhsim03G0253300 Rhododendron simsii HOM05D005541 ORTHO05D006875 2.5e-34 149.4 128 53.1
Manes.14G119600 Manihot esculenta HOM05D005541 ORTHO05D006875 3.3e-34 149.1 130 54.6
Actinidia14228 Actinidia chinensis HOM05D005541 ORTHO05D006875 4.3e-34 148.7 120 54.2
FAN28G0031 Fragaria x ananassa HOM05D005541 ORTHO05D006875 4.3e-34 148.7 119 56.3
MSTRG.6077 Avicennia marina HOM05D005541 ORTHO05D006875 7.3e-34 147.9 120 54.2
CANSAT11G2438 Cannabis sativa HOM05D005541 ORTHO05D006875 7.3e-34 147.9 129 51.9
Gohir.A13G202000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 9.5e-34 147.5 127 53.5
ECA240G1064 Erigeron canadensis HOM05D005541 ORTHO05D006875 1.6e-33 146.7 128 53.9
Glyma.09G091600 Glycine max HOM05D005541 ORTHO05D006875 1.6e-33 146.7 133 51.1
FAN26G0160 Fragaria x ananassa HOM05D005541 ORTHO05D006875 2.1e-33 146.4 119 56.3
Glyma.15G198100 Glycine max HOM05D005541 ORTHO05D006875 2.1e-33 146.4 133 50.4
Cpa.g.sc46.69 Carica papaya HOM05D005541 ORTHO05D006875 2.8e-33 146.0 127 54.3
Gohir.D13G207800 Gossypium hirsutum HOM05D005541 ORTHO05D006875 3.6e-33 145.6 127 52.8
Nn8g39653 Nelumbo nucifera HOM05D005541 ORTHO05D006875 3.6e-33 145.6 154 47.4
Gorai.013G236700 Gossypium raimondii HOM05D005541 ORTHO05D006875 4.7e-33 145.2 127 52.8
HanXRQChr09g0241861 Helianthus annuus HOM05D005541 ORTHO05D006875 1.8e-32 143.3 127 52.0
VMungo1309G2820 Vigna mungo HOM05D005541 ORTHO05D006875 1.8e-32 143.3 143 45.5
Potri.018G118200 Populus trichocarpa HOM05D005541 ORTHO05D006875 2.3e-32 142.9 126 54.0
Actinidia38706 Actinidia chinensis HOM05D005541 ORTHO05D006875 3.1e-32 142.5 129 50.4
ATR0767G116 Amborella trichopoda HOM05D005541 ORTHO05D006875 3.1e-32 142.5 129 54.3
Lj6g0025347 Lotus japonicus HOM05D005541 ORTHO05D006875 5.2e-32 141.7 112 55.4
Potri.006G061600 Populus trichocarpa HOM05D005541 ORTHO05D006875 6.8e-32 141.4 127 52.8
Sabra06G0044200 Salix brachista HOM05D005541 ORTHO05D006875 1.2e-31 140.6 127 52.8
Nitab4.5_0002845g0020 Nicotiana tabacum HOM05D005541 ORTHO05D006875 5.8e-31 138.3 124 50.8
Lalb_Chr11g0073101 Lupinus albus HOM05D005541 ORTHO05D006875 7.5e-31 137.9 132 49.2
Psat1g021320 Pisum sativum HOM05D005541 ORTHO05D006875 7.5e-31 137.9 113 53.1
AUR62011221 Chenopodium quinoa HOM05D005541 ORTHO05D006875 9.8e-31 137.5 129 50.4
Medtr2g450740 Medicago truncatula HOM05D005541 ORTHO05D006875 1.7e-30 136.7 137 49.6
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea HOM05D005541 ORTHO05D006875 2.2e-30 136.3 115 51.3
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea HOM05D005541 ORTHO05D006875 2.2e-30 136.3 115 51.3
Phvul.009G212200 Phaseolus vulgaris HOM05D005541 ORTHO05D006875 2.2e-30 136.3 143 44.8
CAN.G1281.6 Capsicum annuum HOM05D005541 ORTHO05D006875 3.7e-30 135.6 144 44.4
AUR62020012 Chenopodium quinoa HOM05D005541 ORTHO05D006875 3.7e-30 135.6 125 49.6
Oeu012222.1 Olea europaea HOM05D005541 ORTHO05D006875 3.7e-30 135.6 124 50.0
Solyc07g007380.4 Solanum lycopersicum HOM05D005541 ORTHO05D006875 4.9e-30 135.2 119 47.1
Sopen07g003450 Solanum pennellii HOM05D005541 ORTHO05D006875 4.9e-30 135.2 119 47.1
Nitab4.5_0002286g0050 Nicotiana tabacum HOM05D005541 ORTHO05D006875 6.4e-30 134.8 124 49.2
Peaxi162Scf00088g00520 Petunia axillaris HOM05D005541 ORTHO05D006875 8.3e-30 134.4 129 48.1
PGSC0003DMG400030689 Solanum tuberosum HOM05D005541 ORTHO05D006875 8.3e-30 134.4 119 47.1
Lalb_Chr08g0233581 Lupinus albus HOM05D005541 ORTHO05D006875 2.4e-29 132.9 129 48.1
Hund09308 Selenicereus undatus HOM05D005541 ORTHO05D006875 4.1e-29 132.1 128 47.7
Ca_03100_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 2.0e-28 129.8 114 50.9
Gohir.D08G101500 Gossypium hirsutum HOM05D005541 ORTHO05D006875 6.0e-28 128.3 127 49.6
THA.LOC104815290 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 6.0e-28 128.3 126 49.2
A05p11950 Brassica napus HOM05D005541 ORTHO05D006875 1.0e-27 127.5 130 47.7
BraA05t20138Z Brassica rapa HOM05D005541 ORTHO05D006875 1.0e-27 127.5 130 47.7
Sp4g15930 Schrenkiella parvula HOM05D005541 ORTHO05D006875 1.7e-27 126.7 129 46.5
CDE02G2611 Ceratophyllum demersum HOM05D005541 ORTHO05D006875 3.9e-27 125.6 122 43.4
Haze_25444 Corylus avellana HOM05D005541 ORTHO05D006875 3.9e-27 125.6 125 48.8
Sc08g0006020 Simmondsia chinensis HOM05D005541 ORTHO05D006875 5.0e-27 125.2 123 47.2
COL.COLO4_33365 Corchorus olitorius HOM05D005541 ORTHO05D006875 6.6e-27 124.8 116 51.7
BcaC02g11442 Brassica carinata HOM05D005541 ORTHO05D006875 8.6e-27 124.4 125 47.2
C04p15500 Brassica napus HOM05D005541 ORTHO05D006875 8.6e-27 124.4 125 47.2
BolC4t23121H Brassica oleracea HOM05D005541 ORTHO05D006875 8.6e-27 124.4 125 47.2
BcaB02g10581 Brassica carinata HOM05D005541 ORTHO05D006875 1.1e-26 124.0 129 48.1
BcaB01g03929 Brassica carinata HOM05D005541 ORTHO05D006875 1.6e-25 120.2 125 44.8
BolC3t14579H Brassica oleracea HOM05D005541 ORTHO05D006875 1.6e-25 120.2 130 45.4
AT5G35080 Arabidopsis thaliana HOM05D005541 ORTHO05D006875 2.8e-25 119.4 126 46.0
Pp3c2_6810 Physcomitrium patens HOM05D005541 ORTHO05D006875 8.1e-25 117.9 122 42.6
Thhalv10002066m.g Eutrema salsugineum HOM05D005541 ORTHO05D006875 1.1e-24 117.5 129 44.2
THA.LOC104808948 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 1.1e-24 117.5 126 45.2
C03p21960 Brassica napus HOM05D005541 ORTHO05D006875 1.8e-24 116.7 130 44.6
MBI15_g25760_MAGBIO Magnolia biondii HOM05D005541 ORTHO05D006875 1.8e-24 116.7 217 33.6
Lj7A439T20 Lonicera japonica HOM05D005541 ORTHO05D006875 5.2e-24 115.2 93 54.8
Aa31LG10G11810 Aethionema arabicum HOM05D005541 ORTHO05D006875 6.8e-24 114.8 132 43.2
Eucgr.C00480 Eucalyptus grandis HOM05D005541 ORTHO05D006875 1.5e-23 113.6 127 44.9
Carub.0007s3085 Capsella rubella HOM05D005541 ORTHO05D006875 2.9e-22 109.4 144 40.3
Dinv41444 Davidia involucrata HOM05D005541 ORTHO05D006875 8.3e-22 107.8 85 55.3
CSS0024399 Camellia sinensis var. sinensis HOM05D005541 ORTHO05D006875 1.4e-21 107.1 84 53.6
SMO174G0227 Selaginella moellendorffii HOM05D005541 ORTHO05D006875 1.2e-20 104.0 109 40.4
EL10Ac8g18781 Beta vulgaris HOM05D005541 ORTHO05D006875 2.1e-20 103.2 91 51.6
Pp3c1_27810 Physcomitrium patens HOM05D005541 ORTHO05D006875 3.5e-20 102.4 112 42.9
Gohir.D13G208000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 7.8e-20 101.3 84 53.6
Mapoly0020s0022 Marchantia polymorpha HOM05D005541 ORTHO05D006875 2.3e-19 99.8 128 43.0
Ah.09g224130 Amaranthus hybridus HOM05D005541 ORTHO05D006875 3.9e-19 99.0 86 51.2
CARHR217140 Cardamine hirsuta HOM05D005541 ORTHO05D006875 1.2e-17 94.0 89 48.3
BcaC01g05834 Brassica carinata HOM05D005541 ORTHO05D006875 2.0e-15 86.7 87 44.8
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis HOM05D005541 ORTHO05D006875 1.3e-14 84.0 109 36.7
Oeu028018.1 Olea europaea HOM05D005541 ORTHO05D006875 3.7e-14 82.4 97 45.4
MCO11G854 Micromonas commoda HOM05D005541 ORTHO05D006875 1.4e-08 63.9 93 38.7


User provided reference genes

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