Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0642250 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D016363 9.0e-139 496.9 246 100.0
Os06g0641866 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D016363 5.7e-69 265.0 241 62.7
Os06g0641932 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D016363 4.4e-45 185.7 214 55.1
Os02g0184800 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D037150 1.3e-36 157.5 242 45.5
Os06g0641066 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D016363 6.9e-30 135.2 249 42.6
Zm00001eb234460 Zea mays HOM05D010041 ORTHO05D037150 2.0e-29 133.7 253 41.9
Os02g0185766 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D295862 3.5e-26 122.9 246 42.3
Os02g0185350 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D037150 1.6e-23 114.0 211 42.7
Os06g0642550 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 2.0e-21 107.1 243 40.7
Zm00001eb030040 Zea mays HOM05D010041 ORTHO05D016363 3.2e-19 99.8 108 57.4
Os03g0595050 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D016363 1.6e-15 87.4 238 34.5
Os02g0570800 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D301928 3.6e-15 86.3 250 37.2
Os01g0957500 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D016363 3.1e-14 83.2 95 52.6
Os03g0741525 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D016363 1.3e-12 77.8 242 36.8
Os06g0671375 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D299389 6.4e-12 75.5 211 38.4
Os10g0439986 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D297725 3.2e-11 73.2 234 34.6
Os02g0278450 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D293179 7.1e-11 72.0 249 31.7
Os03g0594250 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D300007 2.7e-10 70.1 254 33.1
Os08g0105850 Oryza sativa ssp. japonica HOM05D043651 ORTHO05D049992 2.7e-10 70.1 182 39.0
Os01g0227350 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D293142 1.8e-09 67.4 204 35.3
Os10g0439862 Oryza sativa ssp. japonica HOM05D010041 ORTHO05D298744 1.8e-09 67.4 191 36.6
SGA_v2.0_scaffold51G18709 Striga asiatica HOM05D026254 ORTHO05D016363 1.6e-07 60.8 167 35.9


User provided reference genes

Program Settings