Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 5.2e-44 181.4 138 100.0
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 2.3e-12 76.3 69 55.1
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 1.2e-11 73.9 66 56.1
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 2.6e-11 72.8 82 48.8
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 3.4e-11 72.4 79 45.6
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 9.8e-11 70.9 77 49.4
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.3e-10 70.5 79 49.4
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 2.2e-10 69.7 77 48.1
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 2.9e-10 69.3 77 46.8
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 3.7e-10 68.9 80 50.0
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 6.4e-10 68.2 79 48.1
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 8.3e-10 67.8 143 38.5
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 1.1e-09 67.4 77 50.6
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 2.4e-09 66.2 80 50.0
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 3.2e-09 65.9 77 46.8
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 5.4e-09 65.1 78 44.9
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 1.2e-08 63.9 78 44.9
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 2.0e-08 63.2 79 40.5
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 2.0e-08 63.2 72 47.2
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 2.0e-08 63.2 78 44.9
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 2.7e-08 62.8 79 48.1
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 3.5e-08 62.4 137 31.4
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 3.5e-08 62.4 78 44.9
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 7.8e-08 61.2 81 40.7
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.3e-07 60.5 79 45.6
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.3e-07 60.5 79 43.0
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.7e-07 60.1 76 43.4
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 2.3e-07 59.7 78 43.6
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 3.0e-07 59.3 79 45.6
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 5.0e-07 58.5 79 44.3
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 1.1e-06 57.4 70 47.1
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.5e-06 57.0 72 44.4
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.5e-06 57.0 72 44.4
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 1.9e-06 56.6 79 40.5
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 2.5e-06 56.2 78 39.7
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 2.5e-06 56.2 72 41.7
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 3.3e-06 55.8 79 41.8
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 3.3e-06 55.8 78 43.6
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 7.3e-06 54.7 77 40.3
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 7.3e-06 54.7 77 40.3


User provided reference genes

Program Settings