Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 8.1e-146 520.4 264 100.0
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 8.1e-45 184.9 233 50.2
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 4.6e-40 169.1 274 42.7
Zm00001eb203870 Zea mays HOM05D004891 ORTHO05D005997 4.6e-40 169.1 274 43.8
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 2.3e-39 166.8 267 44.9
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 9.6e-38 161.4 280 41.1
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 1.6e-37 160.6 280 42.9
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 2.8e-37 159.8 279 40.5
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 1.1e-36 157.9 281 40.9
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 1.4e-36 157.5 233 47.6
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 1.8e-36 157.1 265 41.5
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 5.3e-36 155.6 260 40.4
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 5.3e-36 155.6 276 42.0
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 9.0e-36 154.8 271 40.6
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 1.2e-35 154.5 271 40.6
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 2.6e-35 153.3 261 39.5
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 3.4e-35 152.9 273 38.8
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 4.5e-35 152.5 280 39.3
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 4.5e-35 152.5 280 39.3
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 4.5e-35 152.5 279 40.1
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 4.5e-35 152.5 277 40.1
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 5.8e-35 152.1 276 39.9
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 5.8e-35 152.1 261 39.8
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 5.8e-35 152.1 259 40.5
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 7.6e-35 151.8 261 39.1
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 9.9e-35 151.4 285 40.4
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 9.9e-35 151.4 286 38.8
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 9.9e-35 151.4 277 40.4
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 9.9e-35 151.4 262 41.2
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 1.3e-34 151.0 264 40.9
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 1.3e-34 151.0 284 38.4
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 1.3e-34 151.0 264 40.2
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.7e-34 150.6 273 39.9
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 2.2e-34 150.2 272 39.7
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 2.2e-34 150.2 284 37.3
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 2.9e-34 149.8 272 39.3
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 3.8e-34 149.4 274 39.1
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 4.9e-34 149.1 231 42.0
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 4.9e-34 149.1 277 40.4
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 6.4e-34 148.7 264 39.8
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 1.1e-33 147.9 264 38.3
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 1.4e-33 147.5 271 36.9
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.4e-33 147.5 297 37.0
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 1.4e-33 147.5 277 38.3
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 1.4e-33 147.5 269 40.9
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.4e-33 147.5 222 41.4
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 1.9e-33 147.1 277 37.9
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 1.9e-33 147.1 231 42.0
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.9e-33 147.1 222 41.4
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 1.9e-33 147.1 236 42.4
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.4e-33 146.7 284 39.1
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.4e-33 146.7 285 37.9
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 2.4e-33 146.7 275 37.1
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 2.4e-33 146.7 287 40.1
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 3.2e-33 146.4 265 39.6
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 5.4e-33 145.6 287 39.0
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 7.1e-33 145.2 264 39.8
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 9.3e-33 144.8 268 40.7
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 1.2e-32 144.4 278 38.5
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 1.6e-32 144.1 269 38.3
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 1.6e-32 144.1 221 43.9
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 2.1e-32 143.7 288 37.5
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 2.1e-32 143.7 259 40.2
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 2.7e-32 143.3 275 37.5
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 3.5e-32 142.9 273 39.6
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 4.6e-32 142.5 273 37.7
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 4.6e-32 142.5 234 41.0
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 4.6e-32 142.5 274 38.3
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 6.0e-32 142.1 291 38.8
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 1.0e-31 141.4 293 35.8
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 1.3e-31 141.0 236 40.7
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 2.3e-31 140.2 230 40.0
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 2.3e-31 140.2 224 40.2
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.3e-31 140.2 296 36.8
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 5.1e-31 139.0 268 37.3
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 5.1e-31 139.0 234 41.9
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 5.1e-31 139.0 278 37.4
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.6e-31 138.7 309 35.3
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 6.6e-31 138.7 273 38.1
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 8.7e-31 138.3 237 41.4
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 8.7e-31 138.3 273 35.9
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 8.7e-31 138.3 279 38.7
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 8.7e-31 138.3 254 38.6
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 1.1e-30 137.9 269 37.2
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 1.1e-30 137.9 226 40.7
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 1.1e-30 137.9 268 39.9
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 1.1e-30 137.9 213 41.8
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 1.1e-30 137.9 263 36.9
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 1.5e-30 137.5 228 41.7
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 2.5e-30 136.7 270 37.8
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 3.3e-30 136.3 260 38.1
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 4.3e-30 136.0 228 40.4
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 4.3e-30 136.0 267 37.5
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 4.3e-30 136.0 267 37.5
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 4.3e-30 136.0 267 37.5
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 5.6e-30 135.6 228 41.7
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 1.3e-29 134.4 257 36.6
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 1.3e-29 134.4 257 36.6
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 1.6e-29 134.0 217 40.1
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 1.6e-29 134.0 246 35.0
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 1.6e-29 134.0 230 40.4
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 1.6e-29 134.0 240 38.8
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 1.6e-29 134.0 219 42.9
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 2.8e-29 133.3 221 39.8
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 2.8e-29 133.3 240 38.8
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 3.6e-29 132.9 194 41.8
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 3.6e-29 132.9 268 37.7
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 3.6e-29 132.9 231 39.4
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 4.8e-29 132.5 268 39.6
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 4.8e-29 132.5 224 39.7
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 6.2e-29 132.1 269 36.8
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 6.2e-29 132.1 159 49.1
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 8.1e-29 131.7 219 39.3
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 1.1e-28 131.3 225 42.7
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 1.2e-27 127.9 275 34.5
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 5.8e-27 125.6 227 39.2
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 1.7e-26 124.0 169 45.6
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 1.7e-26 124.0 169 45.6
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 3.8e-26 122.9 145 52.4
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 6.4e-26 122.1 338 31.4
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 4.6e-24 115.9 313 32.3
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 4.6e-24 115.9 212 37.7
CSS0025805 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 2.3e-23 113.6 125 50.4
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 5.1e-23 112.5 254 39.0
AUR62021048 Chenopodium quinoa HOM05D004891 ORTHO05D005997 1.3e-21 107.8 129 45.7
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 4.8e-21 105.9 211 37.9
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 6.2e-21 105.5 158 42.4
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.2e-19 101.3 285 33.0
MSTRG.23354 Avicennia marina HOM05D004891 ORTHO05D005997 1.1e-17 94.7 126 45.2
DCAR_014529 Daucus carota HOM05D004891 ORTHO05D005997 7.1e-17 92.0 127 42.5
Oeu036883.1 Olea europaea HOM05D004891 ORTHO05D005997 1.3e-13 81.3 130 45.4
AL8G27980 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 2.1e-13 80.5 148 35.8
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 3.7e-13 79.7 131 42.0
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 8.2e-13 78.6 131 42.0
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 2.4e-12 77.0 255 27.5
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 9.0e-12 75.1 66 62.1
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 2.6e-11 73.6 146 37.7
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 7.6e-11 72.0 134 38.8
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 1.7e-10 70.9 267 26.6
TAR629G2914 Trochodendron aralioides HOM05D004891 ORTHO05D005997 2.5e-09 67.0 144 36.1
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 1.2e-08 64.7 103 41.7
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 1.0e-07 61.6 117 39.3
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.8e-07 60.8 76 44.7
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 3.9e-07 59.7 85 41.2
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.9e-07 59.7 144 34.0
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.1e-06 58.2 76 42.1
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.9e-06 57.4 96 36.5
Pp3c18_7150 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.5e-06 57.0 109 33.9
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 2.5e-06 57.0 85 51.8
unitig_21.g20770 Utricularia gibba HOM05D000370 ORTHO05D001335 4.3e-06 56.2 171 29.2
SEGI_34742 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 5.7e-06 55.8 95 34.7
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 9.7e-06 55.1 136 30.9


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