Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0492800 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D012886 1.0e-221 773.1 384 100.0
Os06g0492900 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D012886 4.3e-164 581.6 383 75.7
Os01g0596100 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.7e-83 313.9 369 47.2
Os01g0595900 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.1e-69 268.1 374 43.3
Os02g0178200 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.1e-69 268.1 376 44.4
Os04g0208500 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 8.9e-69 265.0 369 42.3
Zm00001eb161220 Zea mays HOM05D000312 ORTHO05D000221 8.9e-69 265.0 371 41.8
Os04g0208600 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 2.9e-67 260.0 371 41.8
Zm00001eb357650 Zea mays HOM05D000312 ORTHO05D000221 3.6e-62 243.0 374 39.8
Os04g0208400 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 2.4e-58 230.3 374 36.4
Os02g0493100 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 4.2e-58 229.6 249 50.6
Os01g0596300 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.6e-54 217.6 338 39.1
Os01g0706266 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 8.4e-51 205.3 260 48.1
Os01g0578500 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 6.0e-41 172.6 372 32.8
Os01g0596700 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 9.6e-39 165.2 376 33.8
Os01g0598400 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 2.7e-33 147.1 373 32.2
Os01g0596600 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 6.9e-29 132.5 350 29.7
Zm00001eb161230 Zea mays HOM05D000312 ORTHO05D000221 1.5e-28 131.3 344 31.1
Os07g0285200 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 7.9e-25 119.0 320 30.6
Os07g0287000 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 2.3e-24 117.5 315 30.5
Os01g0730100 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 4.1e-21 106.7 294 27.2
Os07g0285700 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 3.4e-20 103.6 312 28.8
Zm00001eb305170 Zea mays HOM05D010914 ORTHO05D000221 6.5e-19 99.4 312 28.5
Os07g0242700 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 1.4e-16 91.7 313 29.1
Zm00001eb305100 Zea mays HOM05D010914 ORTHO05D012886 6.7e-16 89.4 375 25.1
Os12g0558366 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 8.8e-16 89.0 347 24.2
Os04g0409100 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 1.2e-12 78.6 347 25.1
Ciclev10011818m.g Citrus clementina HOM05D000312 ORTHO05D000221 2.0e-12 77.8 343 26.8
Cpa.g.sc70.5 Carica papaya HOM05D000312 ORTHO05D000221 3.6e-09 67.0 313 24.9
Os01g0595800 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 1.0e-08 65.5 71 43.7
Prupe.4G160900 Prunus persica HOM05D000051 ORTHO05D000015 1.4e-08 65.1 296 24.0
CiPaw.04G005800 Carya illinoinensis HOM05D000312 ORTHO05D000221 1.8e-08 64.7 350 24.6
Os07g0285450 Oryza sativa ssp. japonica HOM05D010914 ORTHO05D012886 1.8e-08 64.7 215 27.4
Potri.010G134200 Populus trichocarpa HOM05D000312 ORTHO05D000221 6.7e-08 62.8 301 24.3
CSS0047483 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D008290 8.8e-08 62.4 403 21.6
Haze_14072 Corylus avellana HOM05D000312 ORTHO05D000221 8.8e-08 62.4 318 26.4
ECA234G3443 Erigeron canadensis HOM05D000312 ORTHO05D000221 8.8e-08 62.4 319 24.8
Cfa007999 Carpinus fangiana HOM05D000312 ORTHO05D000221 3.3e-07 60.5 319 25.4
GSVIVG01010160001 Vitis vinifera HOM05D000312 ORTHO05D000221 3.3e-07 60.5 316 22.8
Lj2g0016556 Lotus japonicus HOM05D008030 ORTHO05D003385 4.4e-07 60.1 258 24.4
Glyma.13G261600 Glycine max HOM05D008030 ORTHO05D003385 7.5e-07 59.3 282 24.1
Lj2g0007297 Lotus japonicus HOM05D008030 ORTHO05D003385 9.7e-07 58.9 258 24.4
Lj2g0019664 Lotus japonicus HOM05D008030 ORTHO05D003385 9.7e-07 58.9 258 23.6
Nitab4.5_0004837g0050 Nicotiana tabacum HOM05D000051 ORTHO05D000015 9.7e-07 58.9 313 22.7
CAN.G10.6 Capsicum annuum HOM05D000312 ORTHO05D000221 1.3e-06 58.5 342 22.5
Lj2g0012796 Lotus japonicus HOM05D008030 ORTHO05D003385 1.7e-06 58.2 258 24.4
Os01g0730200 Oryza sativa ssp. japonica HOM05D000051 ORTHO05D000221 1.7e-06 58.2 208 29.3
TAR371G0679 Trochodendron aralioides HOM05D000312 ORTHO05D000221 1.7e-06 58.2 300 21.7
Os03g0353300 Oryza sativa ssp. japonica HOM05D022098 ORTHO05D000221 3.7e-06 57.0 308 25.0
Rhsim07G0063700 Rhododendron simsii HOM05D000051 ORTHO05D000015 6.3e-06 56.2 328 26.8


User provided reference genes

Program Settings