Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 7.7e-55 216.9 106 100.0
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 3.6e-44 181.4 106 83.0
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.7e-31 138.7 104 66.3
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 1.0e-30 136.7 101 68.3
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 5.0e-30 134.4 98 66.3
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 8.6e-30 133.7 103 64.1
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.1e-29 133.3 101 65.3
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.5e-29 132.9 98 68.4
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 4.3e-29 131.3 104 62.5
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 5.6e-29 131.0 100 62.0
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 7.3e-29 130.6 99 66.7
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 9.5e-29 130.2 100 65.0
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 1.2e-28 129.8 101 64.4
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.6e-28 129.4 103 61.2
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 2.1e-28 129.0 103 65.0
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 2.1e-28 129.0 101 63.4
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 2.8e-28 128.6 99 63.6
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 4.7e-28 127.9 98 63.3
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 4.7e-28 127.9 98 63.3
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.7e-28 127.9 100 67.0
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 4.7e-28 127.9 100 64.0
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 4.7e-28 127.9 101 64.4
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 4.7e-28 127.9 101 64.4
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 6.2e-28 127.5 101 63.4
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 8.0e-28 127.1 104 62.5
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 8.0e-28 127.1 101 61.4
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 8.0e-28 127.1 101 61.4
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.0e-27 126.7 103 65.0
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.0e-27 126.7 103 64.1
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.0e-27 126.7 103 64.1
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.0e-27 126.7 101 65.3
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.8e-27 125.9 101 62.4
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.8e-27 125.9 101 62.4
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.3e-27 125.6 104 61.5
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 3.1e-27 125.2 101 62.4
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 3.1e-27 125.2 98 63.3
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 3.1e-27 125.2 98 63.3
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 3.1e-27 125.2 98 62.2
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 3.1e-27 125.2 103 63.1
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 3.1e-27 125.2 98 62.2
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 3.1e-27 125.2 101 59.4
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 4.0e-27 124.8 101 61.4
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 4.0e-27 124.8 101 65.3
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 4.0e-27 124.8 103 62.1
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 5.2e-27 124.4 104 60.6
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 5.2e-27 124.4 97 64.9
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 6.8e-27 124.0 98 61.2
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 6.8e-27 124.0 100 63.0
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 6.8e-27 124.0 101 60.4
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 8.9e-27 123.6 98 63.3
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 8.9e-27 123.6 100 62.0
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 8.9e-27 123.6 98 61.2
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 1.2e-26 123.2 103 63.1
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 1.5e-26 122.9 99 61.6
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.5e-26 122.9 98 63.3
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 1.5e-26 122.9 98 63.3
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 2.0e-26 122.5 101 63.4
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 2.0e-26 122.5 101 59.4
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 2.6e-26 122.1 98 59.2
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 3.4e-26 121.7 97 60.8
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 4.4e-26 121.3 103 60.2
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 5.8e-26 120.9 98 62.2
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 7.5e-26 120.6 101 63.4
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 9.8e-26 120.2 96 63.5
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.3e-25 119.8 90 64.4
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.7e-25 119.4 98 61.2
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.7e-25 119.4 98 59.2
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 2.2e-25 119.0 99 60.6
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.9e-25 118.6 91 68.1
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 2.9e-25 118.6 98 59.2
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 3.7e-25 118.2 99 58.6
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.7e-25 118.2 101 62.4
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 4.9e-25 117.9 101 62.4
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 4.9e-25 117.9 105 60.0
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.1e-24 116.7 99 59.6
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.4e-24 116.3 97 61.9
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.4e-24 116.3 101 61.4
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 7.0e-24 114.0 100 61.0
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 7.0e-24 114.0 92 62.0
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.2e-23 113.2 99 55.6
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.6e-23 112.8 103 57.3
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.0e-23 112.5 91 62.6
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 3.5e-23 111.7 103 57.3
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.7e-22 109.4 91 59.3
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 6.6e-22 107.5 97 58.8
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 8.6e-22 107.1 102 52.0
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 8.1e-20 100.5 90 58.9
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 8.9e-19 97.1 77 59.7
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.6e-18 95.5 101 49.5
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 3.4e-18 95.1 98 51.0
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 6.4e-17 90.9 94 48.9
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.4e-16 89.7 79 58.2
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.2e-16 88.6 69 63.8
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.1e-15 85.9 86 51.2
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.9e-13 79.3 59 64.4
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 3.1e-11 72.0 96 41.7
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 3.2e-08 62.0 52 61.5


User provided reference genes

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