Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0302650 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 4.7e-73 277.7 135 100.0
Zm00001eb039010 Zea mays HOM05D000542 ORTHO05D000202 2.1e-20 102.8 135 45.2
Os06g0281800 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 1.5e-15 86.7 134 38.8
Os06g0240050 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 4.6e-12 75.1 134 40.3
Os08g0496800 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 1.3e-09 67.0 123 38.2
Os05g0215066 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 1.6e-09 66.6 130 40.0
Zm00001eb154060 Zea mays HOM05D000542 ORTHO05D000202 3.7e-09 65.5 104 36.5
Os01g0733500 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 6.2e-09 64.7 104 37.5
Os05g0221900 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 8.2e-09 64.3 130 32.3
Zm00001eb033930 Zea mays HOM05D000542 ORTHO05D000202 1.8e-08 63.2 92 39.1
Os04g0225700 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 2.4e-08 62.8 104 36.5
Os05g0217800 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 2.0e-07 59.7 131 35.1
Prupe.1G477400 Prunus persica HOM05D000542 ORTHO05D000202 4.5e-07 58.5 123 34.1
Os05g0215000 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 5.8e-07 58.2 117 31.6
SEGI_30414 Sequoiadendron giganteum HOM05D000542 ORTHO05D000202 5.8e-07 58.2 105 34.3
Prupe.1G476200 Prunus persica HOM05D000542 ORTHO05D000202 1.0e-06 57.4 123 34.1
Prupe.1G477800 Prunus persica HOM05D000542 ORTHO05D000202 1.0e-06 57.4 123 33.3
SEGI_23182 Sequoiadendron giganteum HOM05D000542 ORTHO05D000202 1.3e-06 57.0 105 31.4
Ah.16g104250 Amaranthus hybridus HOM05D000542 ORTHO05D000202 1.7e-06 56.6 127 31.5
Peaxi162Scf00799g00412 Petunia axillaris HOM05D000542 ORTHO05D000202 1.7e-06 56.6 102 31.4
SEGI_00506 Sequoiadendron giganteum HOM05D000542 ORTHO05D000202 1.7e-06 56.6 105 31.4
THA.LOC104799209 Tarenaya hassleriana HOM05D000542 ORTHO05D000202 1.7e-06 56.6 94 37.2
DCAR_004246 Daucus carota HOM05D000542 ORTHO05D000202 2.9e-06 55.8 124 30.6
Potri.009G114600 Populus trichocarpa HOM05D000542 ORTHO05D000202 2.9e-06 55.8 131 29.8
Prupe.1G475300 Prunus persica HOM05D000542 ORTHO05D000202 3.8e-06 55.5 94 35.1
Gorai.005G261700 Gossypium raimondii HOM05D000542 ORTHO05D000202 4.9e-06 55.1 96 38.5
MBI01_g41483_MAGBIO Magnolia biondii HOM05D000542 ORTHO05D000202 4.9e-06 55.1 96 34.4
Medtr4g069040 Medicago truncatula HOM05D000542 ORTHO05D000202 4.9e-06 55.1 131 26.7
Psat7g142040 Pisum sativum HOM05D000542 ORTHO05D000202 4.9e-06 55.1 126 29.4
Prupe.1G475900 Prunus persica HOM05D000542 ORTHO05D000202 4.9e-06 55.1 94 35.1
Prupe.1G477200 Prunus persica HOM05D000542 ORTHO05D000202 4.9e-06 55.1 123 35.0
Zm00001eb371370 Zea mays HOM05D000542 ORTHO05D000202 4.9e-06 55.1 95 36.8
Prupe.1G475500 Prunus persica HOM05D000542 ORTHO05D000202 6.5e-06 54.7 94 36.2
Prupe.8G100000 Prunus persica HOM05D000542 ORTHO05D000202 6.5e-06 54.7 130 30.0
EL10Ac4g07583 Beta vulgaris HOM05D000542 ORTHO05D000202 8.4e-06 54.3 112 33.9
COL.COLO4_18705 Corchorus olitorius HOM05D000542 ORTHO05D000202 8.4e-06 54.3 95 38.9
Prupe.1G477000 Prunus persica HOM05D000542 ORTHO05D000202 8.4e-06 54.3 94 35.1
Prupe.4G169000 Prunus persica HOM05D000542 ORTHO05D000202 8.4e-06 54.3 94 34.0


User provided reference genes

Program Settings