Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.6e-49 198.4 98 100.0
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 1.4e-29 132.9 90 65.6
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.8e-29 132.5 89 66.3
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.9e-29 131.3 91 64.8
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 5.1e-29 131.0 84 70.2
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 5.1e-29 131.0 84 70.2
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 5.1e-29 131.0 90 64.4
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 6.7e-29 130.6 82 72.0
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.1e-28 129.8 82 72.0
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.1e-28 129.8 90 64.4
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.5e-28 129.4 86 68.6
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 2.0e-28 129.0 90 64.4
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.0e-28 129.0 82 70.7
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 2.0e-28 129.0 85 69.4
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.0e-28 129.0 92 64.1
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.6e-28 128.6 91 63.7
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.6e-28 128.6 88 67.0
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 2.6e-28 128.6 82 70.7
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.3e-28 128.3 82 72.0
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 3.3e-28 128.3 84 66.7
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 4.4e-28 127.9 82 70.7
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 4.4e-28 127.9 86 67.4
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 4.4e-28 127.9 84 67.9
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 5.7e-28 127.5 82 72.0
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 5.7e-28 127.5 82 69.5
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 5.7e-28 127.5 82 67.1
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 7.4e-28 127.1 88 65.9
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 7.4e-28 127.1 82 70.7
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.4e-28 127.1 82 70.7
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 7.4e-28 127.1 82 69.5
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 7.4e-28 127.1 78 74.4
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 7.4e-28 127.1 79 74.7
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 7.4e-28 127.1 84 67.9
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 7.4e-28 127.1 84 66.7
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 9.7e-28 126.7 88 63.6
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.3e-27 126.3 79 70.9
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-27 126.3 82 69.5
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 1.7e-27 125.9 87 65.5
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.7e-27 125.9 86 67.4
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.2e-27 125.6 88 67.0
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.2e-27 125.6 82 69.5
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 2.2e-27 125.6 89 64.0
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.2e-27 125.6 86 65.1
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 2.8e-27 125.2 86 66.3
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 3.7e-27 124.8 83 67.5
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.8e-27 124.4 82 68.3
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 4.8e-27 124.4 88 62.5
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 4.8e-27 124.4 82 67.1
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 4.8e-27 124.4 81 66.7
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 6.3e-27 124.0 82 65.9
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 8.2e-27 123.6 86 64.0
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 8.2e-27 123.6 82 65.9
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 8.2e-27 123.6 81 66.7
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 8.2e-27 123.6 82 68.3
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.2e-27 123.6 82 68.3
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.2e-27 123.6 82 68.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 8.2e-27 123.6 82 67.1
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 8.2e-27 123.6 82 64.6
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.1e-26 123.2 82 64.6
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.1e-26 123.2 89 65.2
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.4e-26 122.9 82 69.5
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.4e-26 122.9 82 65.9
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-26 122.5 82 65.9
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.8e-26 122.5 82 63.4
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.8e-26 122.5 87 62.1
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.4e-26 122.1 92 63.0
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 3.1e-26 121.7 82 63.4
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 5.3e-26 120.9 82 68.3
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 9.1e-26 120.2 82 65.9
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.5e-25 119.4 93 62.4
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 1.5e-25 119.4 92 56.5
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 2.0e-25 119.0 90 57.8
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 3.5e-25 118.2 78 67.9
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 3.5e-25 118.2 82 64.6
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 4.5e-25 117.9 84 60.7
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 7.7e-25 117.1 73 74.0
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 7.7e-25 117.1 82 63.4
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.0e-24 116.7 71 70.4
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.0e-24 116.7 89 56.2
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.0e-24 116.7 90 55.6
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.3e-24 116.3 82 63.4
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 1.7e-24 115.9 71 70.4
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.9e-24 115.2 82 65.9
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 5.0e-24 114.4 73 69.9
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 6.5e-24 114.0 71 69.0
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 6.5e-24 114.0 77 67.5
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 8.5e-24 113.6 73 67.1
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.1e-23 113.2 71 71.8
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.5e-23 112.8 78 66.7
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 1.9e-23 112.5 71 69.0
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.9e-23 112.5 79 64.6
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.9e-23 112.5 71 70.4
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.2e-23 110.5 74 64.9
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 9.4e-23 110.2 71 67.6
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 1.2e-22 109.8 72 65.3
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.6e-22 109.4 90 53.3
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 2.7e-22 108.6 71 67.6
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 1.4e-21 106.3 70 68.6
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.3e-21 105.5 68 67.6
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 3.0e-21 105.1 147 40.8
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 4.4e-20 101.3 86 55.8
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 7.4e-20 100.5 59 74.6
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 3.7e-19 98.2 84 60.7
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.0e-17 92.4 67 70.1
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.0e-16 90.1 75 60.0
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 2.2e-16 89.0 58 69.0
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.1e-15 86.7 72 54.2
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.5e-15 84.3 48 79.2
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.2e-14 83.2 72 58.3
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 2.7e-14 82.0 58 62.1
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 5.7e-12 74.3 69 55.1
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 7.5e-12 73.9 87 39.1
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.1e-10 70.1 74 45.9
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 3.1e-10 68.6 79 44.3
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 7.0e-10 67.4 51 62.7
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 1.7e-08 62.8 84 41.7


User provided reference genes

Program Settings