Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 8.0e-54 213.4 100 100.0
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.5e-44 182.6 100 83.0
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 2.0e-44 182.2 100 81.0
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 2.0e-44 182.2 100 81.0
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 3.4e-44 181.4 100 82.0
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 4.4e-44 181.0 99 81.8
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 5.8e-44 180.6 100 81.0
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 1.3e-43 179.5 100 80.0
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.7e-43 179.1 100 82.0
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 1.7e-43 179.1 99 79.8
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 2.2e-43 178.7 100 80.0
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 3.7e-43 177.9 100 82.0
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 4.9e-43 177.6 100 81.0
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 4.9e-43 177.6 100 81.0
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 8.3e-43 176.8 100 78.0
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 8.3e-43 176.8 100 79.0
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 8.3e-43 176.8 100 79.0
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 8.3e-43 176.8 100 79.0
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 1.1e-42 176.4 100 80.0
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 1.1e-42 176.4 100 78.0
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 1.4e-42 176.0 100 79.0
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 1.4e-42 176.0 100 80.0
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.4e-42 176.0 100 80.0
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.4e-42 176.0 100 80.0
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.4e-42 176.0 100 80.0
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 1.4e-42 176.0 100 79.0
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 1.4e-42 176.0 100 79.0
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 2.4e-42 175.3 100 79.0
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 3.2e-42 174.9 100 78.0
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 3.2e-42 174.9 100 78.0
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 3.2e-42 174.9 100 79.0
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 4.1e-42 174.5 100 79.0
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 4.1e-42 174.5 100 77.0
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 4.1e-42 174.5 100 79.0
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 5.4e-42 174.1 100 79.0
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 5.4e-42 174.1 100 79.0
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 5.4e-42 174.1 100 77.0
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 5.4e-42 174.1 100 77.0
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 7.1e-42 173.7 100 79.0
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 7.1e-42 173.7 100 79.0
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 7.1e-42 173.7 100 79.0
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 7.1e-42 173.7 100 78.0
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 9.2e-42 173.3 100 78.0
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 9.2e-42 173.3 100 77.0
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 9.2e-42 173.3 100 77.0
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 1.2e-41 172.9 101 80.2
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 1.2e-41 172.9 100 78.0
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 1.2e-41 172.9 100 78.0
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 2.1e-41 172.2 100 76.0
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 2.1e-41 172.2 100 76.0
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 2.7e-41 171.8 100 77.0
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 2.7e-41 171.8 100 78.0
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 3.5e-41 171.4 100 78.0
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 3.5e-41 171.4 100 77.0
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 6.0e-41 170.6 100 76.0
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 6.0e-41 170.6 100 76.0
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 7.8e-41 170.2 100 76.0
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 1.0e-40 169.9 100 75.0
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.0e-40 169.9 100 76.0
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 1.3e-40 169.5 100 76.0
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.3e-40 169.5 100 76.0
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 1.3e-40 169.5 100 76.0
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 1.3e-40 169.5 100 77.0
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 2.3e-40 168.7 100 76.0
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 2.3e-40 168.7 100 75.0
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 2.3e-40 168.7 100 77.0
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 3.9e-40 167.9 100 76.0
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 5.1e-40 167.5 99 76.8
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 8.6e-40 166.8 100 74.0
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 8.6e-40 166.8 100 75.0
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.1e-39 166.4 100 75.0
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 1.5e-39 166.0 100 74.0
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.5e-39 166.0 100 74.0
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 1.9e-39 165.6 100 76.0
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 2.5e-39 165.2 100 74.0
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 3.3e-39 164.9 100 73.0
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 3.3e-39 164.9 100 74.0
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 3.3e-39 164.9 100 74.0
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 3.3e-39 164.9 100 73.0
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 3.3e-39 164.9 100 73.0
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 3.3e-39 164.9 100 73.0
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 3.3e-39 164.9 100 74.0
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 4.3e-39 164.5 100 74.0
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 4.3e-39 164.5 100 74.0
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 9.5e-39 163.3 100 75.0
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 9.5e-39 163.3 100 72.0
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 1.2e-38 162.9 100 71.0
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.2e-38 162.9 100 73.0
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 3.6e-38 161.4 100 72.0
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 4.7e-38 161.0 100 71.0
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 6.2e-38 160.6 100 70.0
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 8.1e-38 160.2 100 71.0
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 1.8e-37 159.1 100 71.0
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 8.9e-37 156.8 91 78.0
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 5.8e-36 154.1 101 70.3
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.3e-35 152.9 99 69.7
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 1.3e-35 152.9 101 69.3
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 1.0e-32 143.3 100 67.0
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.3e-32 142.9 81 80.2
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 6.6e-32 140.6 95 63.2
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 8.7e-32 140.2 98 62.2
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 1.5e-31 139.4 98 64.3
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 5.1e-24 114.4 91 54.9
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 1.1e-21 106.7 100 51.0
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 7.6e-20 100.5 100 48.0
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 8.4e-19 97.1 62 72.6
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.6e-14 82.8 78 48.7
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 1.0e-08 63.5 46 56.5
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 5.1e-08 61.2 41 75.6
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 1.6e-06 56.2 35 68.6
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 1.6e-06 56.2 35 68.6
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 1.6e-06 56.2 35 68.6
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 1.6e-06 56.2 35 68.6


User provided reference genes

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