Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 7.4e-153 543.9 286 100.0
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 2.5e-100 369.4 288 70.5
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 1.3e-80 303.9 280 53.9
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 3.2e-79 299.3 269 54.3
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 5.4e-79 298.5 274 54.7
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 9.3e-79 297.7 275 54.2
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 3.5e-78 295.8 286 52.8
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 6.0e-78 295.0 270 53.0
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 7.9e-78 294.7 279 54.8
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 1.0e-77 294.3 275 53.8
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.3e-77 293.9 277 52.7
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 1.3e-77 293.9 289 53.3
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 1.7e-77 293.5 278 52.9
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.3e-77 293.1 277 52.7
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 2.3e-77 293.1 271 54.2
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 3.0e-77 292.7 280 53.6
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 5.1e-77 292.0 287 51.9
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 5.1e-77 292.0 289 53.3
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 6.6e-77 291.6 275 54.9
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 6.6e-77 291.6 265 53.2
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 1.5e-76 290.4 280 53.2
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 2.5e-76 289.7 268 53.4
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 2.5e-76 289.7 276 52.5
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 2.5e-76 289.7 270 53.3
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 2.5e-76 289.7 278 52.2
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 2.5e-76 289.7 272 52.6
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 7.4e-76 288.1 281 50.5
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 9.6e-76 287.7 280 52.5
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 1.3e-75 287.3 308 47.7
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 1.6e-75 287.0 270 53.0
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 3.6e-75 285.8 272 52.6
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 4.8e-75 285.4 279 53.0
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 6.2e-75 285.0 279 52.0
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 6.2e-75 285.0 273 51.3
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 8.1e-75 284.6 280 51.4
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 8.1e-75 284.6 274 52.6
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 1.4e-74 283.9 270 53.3
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.4e-74 283.9 278 52.2
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 1.4e-74 283.9 271 53.5
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.8e-74 283.5 279 52.3
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 1.8e-74 283.5 286 51.4
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 2.4e-74 283.1 270 53.0
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 5.3e-74 282.0 270 52.6
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 5.3e-74 282.0 270 52.6
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 1.2e-73 280.8 279 49.1
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 1.5e-73 280.4 261 54.4
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.5e-73 280.4 277 52.0
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 1.5e-73 280.4 283 49.1
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 2.0e-73 280.0 279 49.1
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 2.6e-73 279.6 271 52.0
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 4.5e-73 278.9 270 52.2
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 4.5e-73 278.9 279 51.6
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 4.5e-73 278.9 285 50.2
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 9.9e-73 277.7 269 50.9
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 9.9e-73 277.7 265 53.2
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 9.9e-73 277.7 265 53.2
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.3e-72 277.3 265 53.2
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 1.7e-72 276.9 298 48.0
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 2.2e-72 276.6 269 50.9
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 2.2e-72 276.6 283 49.8
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 2.9e-72 276.2 280 51.4
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 2.9e-72 276.2 280 50.0
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 3.8e-72 275.8 271 52.4
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 4.9e-72 275.4 277 51.3
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 6.4e-72 275.0 275 50.9
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 6.4e-72 275.0 265 52.5
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 8.4e-72 274.6 282 49.3
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 1.4e-71 273.9 280 51.4
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 1.9e-71 273.5 270 51.5
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 2.4e-71 273.1 271 51.7
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 3.2e-71 272.7 278 52.5
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 3.2e-71 272.7 273 50.2
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 3.2e-71 272.7 270 51.9
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 4.2e-71 272.3 280 50.7
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 4.2e-71 272.3 278 50.0
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 5.5e-71 271.9 278 50.0
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 7.1e-71 271.6 270 51.1
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 9.3e-71 271.2 280 50.4
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 4.6e-70 268.9 270 50.7
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 1.0e-69 267.7 279 48.0
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.0e-69 267.7 282 48.6
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 2.3e-69 266.5 270 50.4
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.0e-69 266.2 277 49.1
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 3.3e-68 262.7 253 53.0
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 9.6e-68 261.2 265 49.1
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 1.3e-67 260.8 272 48.5
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 1.6e-67 260.4 281 47.3
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.1e-66 257.7 278 49.6
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 6.9e-66 255.0 294 46.3
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 9.0e-66 254.6 274 48.2
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 1.2e-65 254.2 270 50.4
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 4.5e-65 252.3 267 47.9
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 4.5e-65 252.3 283 49.5
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 6.5e-64 248.4 284 46.1
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 1.1e-63 247.7 254 49.2
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 2.5e-60 236.5 298 44.0
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.3e-59 234.2 212 54.7
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.1e-58 231.1 269 44.6
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 2.4e-58 229.9 179 62.0
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 1.1e-55 221.1 263 46.4
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.9e-55 220.3 173 61.3
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 2.5e-55 219.9 263 45.2
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 2.5e-55 219.9 260 44.2
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.5e-55 219.9 233 49.8
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.2e-54 217.6 164 64.0
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 7.9e-54 214.9 263 44.9
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.5e-52 210.7 260 44.2
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 2.5e-52 209.9 278 41.7
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 3.3e-52 209.5 173 59.0
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 4.3e-52 209.1 173 59.0
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 5.7e-52 208.8 252 45.6
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 4.1e-50 202.6 173 55.5
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 7.2e-47 191.8 145 60.7
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 1.7e-43 180.6 255 39.2
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 5.3e-42 175.6 119 68.1
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 4.5e-41 172.6 243 41.2
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 5.3e-34 149.1 109 60.6
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 3.6e-30 136.3 185 43.8
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 6.1e-30 135.6 220 38.6
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 7.2e-23 112.1 162 42.0
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.1e-22 109.0 162 38.9
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 6.1e-22 109.0 162 41.4
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 6.8e-21 105.5 163 37.4
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 2.6e-20 103.6 80 61.2
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 2.6e-20 103.6 80 61.2
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 9.1e-18 95.1 173 33.5
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 5.0e-16 89.4 92 48.9
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 1.5e-15 87.8 98 43.9
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 7.2e-15 85.5 122 37.7
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 6.1e-14 82.4 143 37.1
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 8.0e-14 82.0 67 59.7
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 2.6e-12 77.0 99 40.4
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.0e-09 67.4 106 37.7
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 5.9e-09 65.9 219 26.5
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 2.9e-08 63.5 100 37.0
Zm00001eb364170 Zea mays HOM05D005447 ORTHO05D006730 1.5e-07 61.2 66 53.0


User provided reference genes

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