Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0147100 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.7e-58 229.2 120 100.0
Zm00001eb377120 Zea mays HOM05D009627 ORTHO05D010887 3.3e-30 135.2 109 66.1
Zm00001eb270400 Zea mays HOM05D009627 ORTHO05D010887 9.7e-30 133.7 110 63.6
Os06g0580100 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 9.1e-28 127.1 117 57.3
Zm00001eb277260 Zea mays HOM05D009627 ORTHO05D010887 2.6e-27 125.6 115 58.3
Os06g0147400 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 2.9e-26 122.1 113 55.8
Os06g0147250 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.1e-25 120.2 113 53.1
Os06g0147000 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.5e-25 119.8 119 58.8
Os01g0238200 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 9.4e-25 117.1 118 51.7
Zm00001eb377070 Zea mays HOM05D009627 ORTHO05D010887 8.8e-23 110.5 114 55.3
Zm00001eb401070 Zea mays HOM05D009627 ORTHO05D010887 8.8e-23 110.5 118 53.4
Os02g0216300 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.2e-22 110.2 106 53.8
Os06g0146800 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.2e-22 110.2 112 57.1
Zm00001eb154990 Zea mays HOM05D009627 ORTHO05D010887 1.3e-21 106.7 113 50.4
Zm00001eb270420 Zea mays HOM05D009627 ORTHO05D010887 1.3e-21 106.7 118 55.1
Zm00001eb339450 Zea mays HOM05D009627 ORTHO05D010887 3.7e-21 105.1 117 48.7
Os01g0714600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 2.7e-19 99.0 111 49.5
Os06g0147300 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 5.9e-19 97.8 105 47.6
Zm00001eb266700 Zea mays HOM05D009627 ORTHO05D010887 5.0e-18 94.7 99 59.6
Zm00001eb377110 Zea mays HOM05D009627 ORTHO05D010887 1.4e-15 86.7 112 50.0
Os01g0585200 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.2e-14 83.6 109 45.9
Os06g0146600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.2e-14 83.6 87 54.0
Os05g0181700 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 9.8e-14 80.5 116 42.2
MBI18_g00962_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 4.8e-13 78.2 101 40.6
Zm00001eb205270 Zea mays HOM05D009627 ORTHO05D010887 1.4e-12 76.6 105 42.9
MBI05_g28284_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D010887 2.4e-12 75.9 112 37.5
MBI05_g05683_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 4.1e-12 75.1 117 35.9
MBI06_g03980_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.2e-11 73.6 106 41.5
MBI03_g32214_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.7e-11 72.4 101 38.6
MBI06_g46441_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 7.7e-11 70.9 115 37.4
MBI03_g33921_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.3e-10 70.1 102 36.3
MBI18_g41917_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.9e-10 68.9 114 35.1
HPP92_007635 Vanilla planifolia HOM05D065668 ORTHO05D010887 5.0e-10 68.2 108 39.8
HPP92_007636 Vanilla planifolia HOM05D065668 ORTHO05D010887 6.6e-10 67.8 110 39.1
MBI03_g35364_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 8.6e-10 67.4 101 37.6
Zm00001eb346920 Zea mays HOM05D009627 ORTHO05D010887 3.3e-09 65.5 103 40.8
MBI18_g01155_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 5.5e-09 64.7 111 34.2
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 2.8e-08 62.4 102 41.2
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.4e-07 60.1 116 36.2
MBI06_g04640_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 1.8e-07 59.7 82 41.5
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.8e-07 59.7 116 36.2
MBI03_g33915_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.0e-06 56.2 101 33.7
Zm00001eb160530 Zea mays HOM05D009627 ORTHO05D010887 3.4e-06 55.5 115 35.7
Os06g0147600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D298704 7.5e-06 54.3 63 50.8


User provided reference genes

Program Settings