Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0147000 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.2e-59 233.0 119 100.0
Os06g0146800 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.0e-34 150.2 113 70.8
Zm00001eb270420 Zea mays HOM05D009627 ORTHO05D010887 2.7e-32 142.1 120 63.3
Os06g0147100 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 2.2e-26 122.5 119 58.8
Zm00001eb377070 Zea mays HOM05D009627 ORTHO05D010887 1.0e-23 113.6 119 55.5
Os02g0216300 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 2.3e-23 112.5 118 54.2
Os06g0580100 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 3.0e-23 112.1 119 54.6
Zm00001eb277260 Zea mays HOM05D009627 ORTHO05D010887 5.1e-23 111.3 109 57.8
Os06g0147250 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 2.8e-21 105.5 111 53.2
Os06g0147400 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.4e-20 103.2 106 52.8
Os06g0147300 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.2e-19 100.1 108 50.9
Os01g0238200 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.5e-19 99.8 109 52.3
Zm00001eb270400 Zea mays HOM05D009627 ORTHO05D010887 6.5e-18 94.4 118 48.3
Zm00001eb154990 Zea mays HOM05D009627 ORTHO05D010887 8.5e-18 94.0 113 47.8
Zm00001eb339450 Zea mays HOM05D009627 ORTHO05D010887 2.1e-16 89.4 112 48.2
Zm00001eb377120 Zea mays HOM05D009627 ORTHO05D010887 7.9e-16 87.4 121 47.1
Zm00001eb205270 Zea mays HOM05D009627 ORTHO05D010887 5.7e-14 81.3 118 42.4
Os01g0714600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.4e-12 76.6 118 44.9
MBI06_g46441_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 6.5e-10 67.8 115 35.7
Os06g0146600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 6.5e-10 67.8 91 40.7
Zm00001eb266700 Zea mays HOM05D009627 ORTHO05D010887 1.4e-09 66.6 100 48.0
Zm00001eb160530 Zea mays HOM05D009627 ORTHO05D010887 1.9e-09 66.2 114 41.2
MBI06_g03980_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.5e-09 65.9 101 39.6
Zm00001eb377110 Zea mays HOM05D009627 ORTHO05D010887 2.5e-09 65.9 105 44.8
HPP92_007636 Vanilla planifolia HOM05D065668 ORTHO05D010887 4.2e-09 65.1 114 35.1
MBI03_g32214_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.7e-08 62.4 121 31.4
MBI18_g00962_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 3.6e-08 62.0 102 34.3
Os01g0585200 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 3.6e-08 62.0 108 38.9
MBI18_g41917_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 4.7e-08 61.6 110 32.7
MBI03_g35364_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 7.9e-08 60.8 102 33.3
Os05g0181700 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D010887 1.4e-07 60.1 108 39.8
MBI06_g04640_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.3e-07 59.3 115 33.9
MBI18_g01155_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 3.9e-07 58.5 100 34.0
MBI03_g33921_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 5.1e-07 58.2 102 29.4
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 6.7e-07 57.8 114 33.3
Os06g0147600 Oryza sativa ssp. japonica HOM05D009627 ORTHO05D298704 3.3e-06 55.5 69 46.4
MBI03_g33915_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 4.4e-06 55.1 102 30.4


User provided reference genes

Program Settings