Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os05g0516300 Oryza sativa ssp. japonica HOM05D007521 ORTHO05D009387 5.8e-62 241.1 161 100.0
Zm00001eb284340 Zea mays HOM05D007521 ORTHO05D009387 8.8e-26 120.9 157 49.7
Ciclev10033598m.g Citrus clementina HOM05D007521 ORTHO05D009387 2.4e-07 59.7 124 34.7
HPP92_019762 Vanilla planifolia HOM05D007521 ORTHO05D009387 3.1e-07 59.3 159 34.0
Migut.F00560 Erythranthe guttata HOM05D007521 ORTHO05D009387 5.3e-07 58.5 122 36.1
Nn2g10221 Nelumbo nucifera HOM05D007521 ORTHO05D009387 9.1e-07 57.8 122 37.7
Lj8C51T1 Lonicera japonica HOM05D007521 ORTHO05D009387 1.2e-06 57.4 115 38.3
CSS0047724 Camellia sinensis var. sinensis HOM05D007521 ORTHO05D009387 1.6e-06 57.0 115 37.4
Cc02_g04870 Coffea canephora HOM05D007521 ORTHO05D009387 1.6e-06 57.0 123 35.0
Cc02_g05020 Coffea canephora HOM05D007521 ORTHO05D009387 1.6e-06 57.0 123 35.0
Sc11g0006120 Simmondsia chinensis HOM05D007521 ORTHO05D009387 1.6e-06 57.0 117 35.0
Lj1g0021108 Lotus japonicus HOM05D007521 ORTHO05D009387 2.6e-06 56.2 126 33.3
Solyc05g052170.4 Solanum lycopersicum HOM05D007521 ORTHO05D009387 3.5e-06 55.8 124 36.3
arahy.Tifrunner.gnm1.ann1.Q2LGCQ Arachis hypogaea HOM05D007521 ORTHO05D009387 4.5e-06 55.5 117 40.2
Lsat_1_v5_gn_8_11100 Lactuca sativa HOM05D007521 ORTHO05D009387 7.7e-06 54.7 140 32.9


User provided reference genes

Program Settings